RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 TRIM6Q9C030 488 aaPredicted RBP31.37■■■□□ 2.61
PABPN1-201ENST00000216727 CXCL16Q9H2A7 254 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 CHST7Q9NS84 486 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 PTPN22Q9Y2R2 807 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 FAM155AB1AL88 458 aaPredicted RBP31.37■■■□□ 2.61
PABPN1-201ENST00000216727 PSMC1P62191 440 aaKnown RBP31.37■■■□□ 2.61
PABPN1-201ENST00000216727 NFX1Q12986 1120 aaKnown RBP31.37■■■□□ 2.61
PABPN1-201ENST00000216727 XYLT1Q86Y38 959 aa31.37■■■□□ 2.61
PABPN1-201ENST00000216727 CRYBB1P53674 252 aaPredicted RBP31.36■■■□□ 2.61
PABPN1-201ENST00000216727 ZNF200P98182 395 aaPredicted RBP31.36■■■□□ 2.61
PABPN1-201ENST00000216727 CCNG2Q16589 344 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 TSPAN18Q96SJ8 248 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 HES2Q9Y543 173 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 M0QYV0 167 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 RFC1P35251 1148 aaPredicted RBP31.36■■■□□ 2.61
PABPN1-201ENST00000216727 LMAN1P49257 510 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 COPS2P61201 443 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 PPP1R7Q15435 360 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 STILQ15468 1287 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 LCLAT1Q6UWP7 414 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 PKNOX2Q96KN3 472 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 HEMGNQ9BXL5 484 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 NXF3Q9H4D5 531 aaKnown RBP31.36■■■□□ 2.61
PABPN1-201ENST00000216727 SYNCQ9H7C4 482 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 TJP2Q9UDY2 1190 aa31.36■■■□□ 2.61
PABPN1-201ENST00000216727 PIN4Q9Y237 131 aaKnown RBP31.36■■■□□ 2.61
PABPN1-201ENST00000216727 DUSP11O75319 330 aaKnown RBP31.35■■■□□ 2.61
PABPN1-201ENST00000216727 RECQL4O94761 1208 aa31.35■■■□□ 2.61
PABPN1-201ENST00000216727 TCF4P15884 667 aa31.35■■■□□ 2.61
PABPN1-201ENST00000216727 PDCLQ13371 301 aa31.35■■■□□ 2.61
PABPN1-201ENST00000216727 POLNQ7Z5Q5 900 aa31.35■■■□□ 2.61
PABPN1-201ENST00000216727 UBLCP1Q8WVY7 318 aaPredicted RBP31.35■■■□□ 2.61
PABPN1-201ENST00000216727 ART4Q93070 314 aa31.35■■■□□ 2.61
PABPN1-201ENST00000216727 DDX56Q9NY93 547 aaKnown RBP31.35■■■□□ 2.61
PABPN1-201ENST00000216727 MTRF1LQ9UGC7 380 aaKnown RBP31.35■■■□□ 2.61
PABPN1-201ENST00000216727 KPNA6O60684 536 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 ERBB2P04626 1255 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 PTPN7P35236 360 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 GJC1P36383 396 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 C7orf31Q8N865 590 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 ATL2Q8NHH9 583 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 ATG4AQ8WYN0 398 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 SLITRK1Q96PX8 696 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 TUBGCP4Q9UGJ1 667 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 UBQLN1Q9UMX0 589 aaKnown RBP31.34■■■□□ 2.61
PABPN1-201ENST00000216727 R3HDM2Q9Y2K5 976 aaKnown RBP31.34■■■□□ 2.61
PABPN1-201ENST00000216727 TRIP12Q14669 1992 aaPredicted RBP31.34■■■□□ 2.61
PABPN1-201ENST00000216727 GOLGA8SH3BPF8 625 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 KRT17Q04695 432 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 ATP13A4Q4VNC1 1196 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 ANKS1BQ7Z6G8 1248 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 MCRS1Q96EZ8 462 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 TLL2Q9Y6L7 1015 aa31.34■■■□□ 2.61
PABPN1-201ENST00000216727 CTGFP29279 349 aa31.33■■■□□ 2.61
PABPN1-201ENST00000216727 SNX1Q13596 522 aa31.33■■■□□ 2.61
PABPN1-201ENST00000216727 RNF25Q96BH1 459 aaPredicted RBP31.33■■■□□ 2.61
PABPN1-201ENST00000216727 WHRNQ9P202 907 aa31.33■■■□□ 2.61
PABPN1-201ENST00000216727 SCN1AP35498 2009 aa31.33■■■□□ 2.61
PABPN1-201ENST00000216727 GAS8O95995 478 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 PSMA2P25787 234 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 PTK6Q13882 451 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 XKR4Q5GH76 650 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 CEP85LQ5SZL2 805 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 JOSD2Q8TAC2 188 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 ATP8A1Q9Y2Q0 1164 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 SNX9Q9Y5X1 595 aa31.32■■■□□ 2.61
PABPN1-201ENST00000216727 KRT1P04264 644 aa31.32■■■□□ 2.6
PABPN1-201ENST00000216727 ATF7P17544 494 aaPredicted RBP31.32■■■□□ 2.6
PABPN1-201ENST00000216727 UBXN11Q5T124 520 aa31.32■■■□□ 2.6
PABPN1-201ENST00000216727 C9orf57Q5W0N0 161 aa31.32■■■□□ 2.6
PABPN1-201ENST00000216727 TAF2Q6P1X5 1199 aa31.32■■■□□ 2.6
PABPN1-201ENST00000216727 C18orf25Q96B23 403 aaPredicted RBP31.32■■■□□ 2.6
PABPN1-201ENST00000216727 MIS12Q9H081 205 aa31.32■■■□□ 2.6
PABPN1-201ENST00000216727 PPEF2O14830 753 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 TM4SF4P48230 202 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 TRPV1Q8NER1 839 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 TSPAN16Q9UKR8 245 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 PDCD11Q14690 1871 aaKnown RBP31.31■■■□□ 2.6
PABPN1-201ENST00000216727 GOLGA6L10A6NI86 522 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 TJP3O95049 919 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 CD4P01730 458 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 KCNE1P15382 129 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 CYP3A5P20815 502 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 ZNF844Q08AG5 666 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 MFSD7Q6UXD7 560 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 TMBIM4Q9HC24 238 aa31.31■■■□□ 2.6
PABPN1-201ENST00000216727 CA12O43570 354 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 AKAP5P24588 427 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 GJA9P57773 515 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 CALCOCO2Q13137 446 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 ACAP1Q15027 740 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 GLRA4Q5JXX5 417 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 SPOCD1Q6ZMY3 1216 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 UNC93AQ86WB7 457 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 IPO4Q8TEX9 1081 aaKnown RBP31.3■■■□□ 2.6
PABPN1-201ENST00000216727 ATP6V1G3Q96LB4 118 aa31.3■■■□□ 2.6
PABPN1-201ENST00000216727 MRPL45Q9BRJ2 306 aaKnown RBP31.3■■■□□ 2.6
PABPN1-201ENST00000216727 PABPC3Q9H361 631 aaKnown RBP31.3■■■□□ 2.6
PABPN1-201ENST00000216727 METTL5Q9NRN9 209 aaKnown RBP31.3■■■□□ 2.6
PABPN1-201ENST00000216727 SMIM28A0A1B0GU29 152 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms