RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 PRG3Q9Y2Y8 225 aaPredicted RBP24.16■■□□□ 1.46
TARBP1-201ENST00000040877 SNX5Q9Y5X3 404 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 COL5A2P05997 1499 aaPredicted RBP24.16■■□□□ 1.46
TARBP1-201ENST00000040877 TCP11X1B4DZS4 312 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 H0Y3Z8 333 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 FOXN3O00409 490 aaPredicted RBP24.16■■□□□ 1.46
TARBP1-201ENST00000040877 STRNO43815 780 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 EEF1DP29692 281 aaKnown RBP24.16■■□□□ 1.46
TARBP1-201ENST00000040877 RGS9BPQ6ZS82 235 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 GRID1Q9ULK0 1009 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 TMEM131LA2VDJ0 1609 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 DCDC2CA8MYV0 355 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 IL10P22301 178 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 ITGA8P53708 1063 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 EPHB2P29323 1055 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 C3orf62Q6ZUJ4 267 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 OTUB1Q96FW1 271 aaPredicted RBP24.16■■□□□ 1.46
TARBP1-201ENST00000040877 EPN3Q9H201 632 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 LATS2Q9NRM7 1088 aa24.16■■□□□ 1.46
TARBP1-201ENST00000040877 B3GAT3O94766 335 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 BCAT1P54687 386 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 THAP2Q9H0W7 228 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 ANLNQ9NQW6 1124 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 AP1G2O75843 785 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 TTC39BQ5VTQ0 682 aaPredicted RBP24.15■■□□□ 1.46
TARBP1-201ENST00000040877 GJB7Q6PEY0 223 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 ABTB1Q969K4 478 aaPredicted RBP24.15■■□□□ 1.46
TARBP1-201ENST00000040877 MTMR12Q9C0I1 747 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 DDIT4Q9NX09 232 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 LRG1P02750 347 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 MYL2P10916 166 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 RBM43Q6ZSC3 357 aaKnown RBP24.15■■□□□ 1.46
TARBP1-201ENST00000040877 CATSPER1Q8NEC5 780 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 WDCPQ9H6R7 721 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 NFIBO00712 420 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 SUPT3HO75486 399 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 LONRF1Q17RB8 773 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 FBXO16Q8IX29 292 aaPredicted RBP24.15■■□□□ 1.46
TARBP1-201ENST00000040877 ATP8B4Q8TF62 1192 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 TASP1Q9H6P5 420 aa24.15■■□□□ 1.46
TARBP1-201ENST00000040877 PRLRP16471 622 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 TWF1Q12792 350 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 HIC1Q14526 733 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 PKN1Q16512 942 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 CYP4A22Q5TCH4 519 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 ABI2Q9NYB9 513 aaPredicted RBP24.14■■□□□ 1.46
TARBP1-201ENST00000040877 HOXA10P31260 410 aaPredicted RBP24.14■■□□□ 1.46
TARBP1-201ENST00000040877 GUCY1A3Q02108 690 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 EPC2Q52LR7 807 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 IPMKQ8NFU5 416 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 KIF20BQ96Q89 1820 aa24.14■■□□□ 1.46
TARBP1-201ENST00000040877 GOLGA8RI6L899 631 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 CYP11B1P15538 503 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 GEMP55040 296 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 RPL10AP62906 217 aaKnown RBP24.14■■□□□ 1.45
TARBP1-201ENST00000040877 CUL3Q13618 768 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 SMTNL2Q2TAL5 461 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 CBWD1Q9BRT8 395 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 CHCHD3Q9NX63 227 aaKnown RBP24.14■■□□□ 1.45
TARBP1-201ENST00000040877 M0QYT0 321 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 LHX1P48742 406 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 CYP24A1Q07973 514 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 TMEM132BQ14DG7 1078 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 SMAD1Q15797 465 aaKnown RBP24.14■■□□□ 1.45
TARBP1-201ENST00000040877 DNAL1Q4LDG9 190 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 SHCBP1Q8NEM2 672 aa24.14■■□□□ 1.45
TARBP1-201ENST00000040877 PXDNQ92626 1479 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 PRPF4O43172 522 aaKnown RBP eCLIP24.13■■□□□ 1.452e-6■■■■□ 23.1
TARBP1-201ENST00000040877 PGK2P07205 417 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 CHN1P15882 459 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 PRMT1Q99873 361 aaKnown RBP24.13■■□□□ 1.45
TARBP1-201ENST00000040877 KIF17Q9P2E2 1029 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 TEKT2Q9UIF3 430 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 MCL1Q07820 350 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 PGM5Q15124 567 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 RARS2Q5T160 578 aaKnown RBP24.13■■□□□ 1.45
TARBP1-201ENST00000040877 PTRHD1Q6GMV3 140 aaKnown RBP24.13■■□□□ 1.45
TARBP1-201ENST00000040877 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
TARBP1-201ENST00000040877 A0A087X0T9 212 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 SYCE1LA8MT33 242 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 FAM228BP0C875 321 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 ACTN3Q08043 901 aaPredicted RBP24.13■■□□□ 1.45
TARBP1-201ENST00000040877 SRLQ86TD4 932 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 STAMBPL1Q96FJ0 436 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 CYP4F11Q9HBI6 524 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 KDM1AO60341 852 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 VEGFAP15692 232 aaPredicted RBP24.13■■□□□ 1.45
TARBP1-201ENST00000040877 HERVK_113P62684 666 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 CEP19Q96LK0 163 aa24.13■■□□□ 1.45
TARBP1-201ENST00000040877 A0A0A6YYK5 440 aaPredicted RBP24.12■■□□□ 1.45
TARBP1-201ENST00000040877 ELAVL2Q12926 359 aaKnown RBP24.12■■□□□ 1.45
TARBP1-201ENST00000040877 FAM117BQ6P1L5 589 aa24.12■■□□□ 1.45
TARBP1-201ENST00000040877 CDR2LQ86X02 465 aaPredicted RBP24.12■■□□□ 1.45
TARBP1-201ENST00000040877 GPR63Q9BZJ6 419 aa24.12■■□□□ 1.45
TARBP1-201ENST00000040877 PKP3Q9Y446 797 aa24.12■■□□□ 1.45
TARBP1-201ENST00000040877 APOA4P06727 396 aa24.12■■□□□ 1.45
TARBP1-201ENST00000040877 VIL1P09327 827 aaKnown RBP24.12■■□□□ 1.45
TARBP1-201ENST00000040877 CD44P16070 742 aaKnown RBP24.12■■□□□ 1.45
TARBP1-201ENST00000040877 PCSK7Q16549 785 aa24.12■■□□□ 1.45
TARBP1-201ENST00000040877 HOMEZQ8IX15 550 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms