RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Hyou1Q9JKR6 999 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sf3b1Q99NB9 1304 aaKnown RBP10.18□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mageb4A2A9R3 556 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ttll11A4Q9F4 727 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Olfr292F8VQ84 308 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Serpini1O35684 410 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 CraddO88843 199 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Abcb4P21440 1276 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 AdslP54822 484 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Arl4cP61208 192 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Frg1P97376 258 aaKnown RBP10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gpatch4Q3TFK5 415 aaKnown RBP10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Macrod2Q3UYG8 475 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 FdxrQ61578 494 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dnajc1Q61712 552 aaKnown RBP10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Senp6Q6P7W0 1132 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ssxb5Q6XAS2 159 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 NpntQ91V88 561 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ecrg4Q99LS0 148 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gtf2ird2Q99NI3 936 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pole4Q9CQ36 118 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cmtm5Q9D6G9 156 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gm11985A0A1B0GS61 206 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Bpifb9bA2AJD1 591 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Nmt1O70310 496 aaKnown RBP10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc16a2O70324 545 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Hoxc11P31313 304 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trim72Q1XH17 477 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trim21Q62191 470 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Six1Q62231 284 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Zrsr1Q64707 428 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gramd1bQ80TI0 738 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Bpifb9aQ80XI7 591 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lrrc27Q80YS5 523 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Itih5Q8BJD1 952 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 PolrmtQ8BKF1 1207 aaKnown RBP10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pkn2Q8BWW9 983 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Myoz3Q8R4E4 245 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Epn3Q91W69 636 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rin1Q921Q7 763 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Q9CPZ3 230 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lyrm1Q9CQB7 122 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 B4galt4Q9JJ04 344 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rasgrp2Q9QUG9 608 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 ClcnkbQ9WUB6 687 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 LipaQ9Z0M5 397 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 SynrgQ5SV85 1306 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lamb1P02469 1786 aa10.17□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dcst2A0A140LIJ0 701 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cfap221A9Q751 836 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Slc35g2D3YVE8 412 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Sema6bO54951 886 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Kcnu1O54982 1121 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tlk2O55047 718 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Top3aO70157 1003 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 CopeO89079 308 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gstm1P10649 218 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 YwhagP61982 247 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lrrc36Q3V0M2 755 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Syce1lQ5D525 247 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Itih1Q61702 907 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Txndc15Q6P6J9 344 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dennd2cQ6P9P8 914 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 DcstampQ7TNJ0 470 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Prap1Q80XD8 149 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Pqlc1Q80XM9 271 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fut11Q8BHC9 489 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ppp1r37Q8BKR5 712 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 NkrfQ8BY02 690 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Bbs7Q8K2G4 715 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Fam114a2Q8VE88 497 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Cbwd1Q8VEH6 393 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Olfr866Q8VFI7 312 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Trub2Q91WG3 331 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Gbp7Q91Z40 638 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Afg3l1Q920A7 789 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Acsl3Q9CZW4 720 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 TarsQ9D0R2 722 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Mipol1Q9D9F8 279 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rbp7Q9EPC5 134 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rreb1Q3UH06 1700 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 DccP70211 1447 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Lcn5A2AJB7 192 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rabgap1lA6H6A9 815 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Capn5O08688 640 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Rpl21O09167 160 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Krt18P05784 423 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Hoxc9P09633 260 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Prkg1P0C605 671 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Oas1aP11928 367 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Igfbp6P47880 238 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Myl2P51667 166 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Atp5bP56480 529 aaKnown RBP10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Tmprss15P97435 1069 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ebf1Q07802 591 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Kctd19Q562E2 927 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Bcap31Q61335 245 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Dlg4Q62108 724 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Prr18Q6PAN7 307 aa10.16□□□□□ -0.78
Hmgb1-201ENSMUST00000085546 Ccnt2Q7TQK0 723 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms