RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 RykQ01887 594 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ift88Q61371 824 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Fstl1Q62356 306 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gga2Q6P5E6 603 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cfap206Q6PE87 622 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Arhgef38Q80VK6 770 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 DpcdQ8BPA8 203 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 PreplQ8C167 725 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Dmtf1Q8CE22 761 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Plcxd1Q8CHS4 345 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 D2hgdhQ8CIM3 535 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Nudt13Q8JZU0 352 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 IntS13Q8QZV7 732 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Olfr47Q8VF18 321 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ttll1Q91V51 423 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ssbp3Q9D032 388 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Serpinb3bQ9D1Q5 387 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Tmem81Q9D5K1 259 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cnbd2Q9D5U8 673 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Pebp4Q9D9G2 242 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Pkd2l2Q9JLG4 621 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Spo11Q9WTK8 396 aa8.27□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Tcp10cE9Q046 482 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Rundc3aO08576 446 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Phxr5P08399 672 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Nedd4P46935 887 aaKnown RBP8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Coq10bQ3THF9 240 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Rapgef1Q3UHC1 1224 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Pld6Q5SWZ9 221 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Zfp663Q6NXM6 656 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ddx58Q6Q899 926 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cfap61Q8CEL2 1252 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 P3h2Q8CG71 703 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Syne4Q8CII8 388 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gfm1Q8K0D5 751 aaKnown RBP8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Pitrm1Q8K411 1036 aaKnown RBP8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cdhr1Q8VHP6 859 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Apobec3Q99J72 440 aaKnown RBP8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Rabl3Q9D4V7 236 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Serpina1fQ9DCQ7 411 aa8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 VirmaA2AIV2 1811 aaKnown RBP8.26□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Smurf2A2A5Z6 748 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cyp4a12bA2A974 508 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Map7d2A2AG50 781 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Klhl32A2AJX0 620 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Tmem200bD3Z0P8 284 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Klhl3E0CZ16 587 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Trim30bE9PVL6 203 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gm4791J3QQ14 102 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 AgxtO35423 414 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Il1aP01582 270 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gnai2P08752 355 aaKnown RBP8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 PfklP12382 780 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 NefhP19246 1090 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ccnd2P30280 289 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 LdlrP35951 862 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Acsl1P41216 699 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 RorcP51450 516 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Q3TEI4 1023 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Qsox2Q3TMX7 692 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ccdc181Q80ZU5 509 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Agap1Q8BXK8 857 aaKnown RBP8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Kct2Q8K201 259 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 TbccQ8VCN9 341 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Trex1Q91XB0 314 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Exosc5Q9CRA8 235 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cysrt1Q9D1E4 142 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Rnft1Q9DCN7 395 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 C1ql3Q9ESN4 255 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Nox4Q9JHI8 578 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Dok3Q9QZK7 444 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Sae1Q9R1T2 350 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Scnn1gQ9WU39 655 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Spef2Q8C9J3 1734 aa8.25□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Col15a1O35206 1367 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Abca3Q8R420 1704 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Kdm6aO70546 1401 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 2210011C24RikA0A087WQ89 206 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Tex13c2A0A0G2JGA3 530 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gm20604F8WIA3 75 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Serpinb3aG3X9V8 387 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Olfr1121L7MTT1 314 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Dnajb5O89114 348 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Stt3aP46978 705 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ankrd23Q812A3 306 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 BoraQ8BS90 525 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 SynpoQ8CC35 929 aaKnown RBP8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 ItpkaQ8R071 459 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Rwdd3Q8VIL2 267 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Frmd4bQ920B0 1035 aa8.24□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Zfp963D3Z2T8 383 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gm4312K9J7E2 289 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Olfr741L7N1Y5 311 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Gm4340L7N2C4 268 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Nck2O55033 380 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Cxcr3O88410 367 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ctbp1O88712 441 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Il2raP01590 268 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 RabggtbP53612 339 aa8.23□□□□□ -1.09
Ccdc54-201ENSMUST00000062439 Ccne1Q61457 408 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms