RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Defb28Q3V2L0 89 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Hepacam2Q4VAH7 463 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Csgalnact2Q8C1F4 542 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Kctd2Q8CEZ0 266 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Dync1li1Q8R1Q8 523 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Q91WD4 421 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Tlr3Q99MB1 905 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Snw1Q9CSN1 536 aaKnown RBP16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Usp29Q9ES63 869 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Adamts5Q9R001 930 aa16.46■□□□□ 0.23
Sf3b6-201ENSMUST00000046207 Gm7903A2AWL1 463 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Gm21293E9Q4G9 266 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Epb41l2O70318 988 aaKnown RBP16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Myl4P09541 193 aaKnown RBP16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Irf8P23611 424 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Evx2P49749 475 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Tnfaip8l3Q3TBL6 204 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Leo1Q5XJE5 667 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Serpinb6Q60854 378 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Sema4cQ64151 834 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Q6GQV0 436 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Tatdn1Q6P8M1 295 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 DstykQ6XUX1 927 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 FukQ7TMC8 1090 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Defb34Q7TNV8 81 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Cfap100Q80VN0 613 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Spata20Q80YT5 790 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Srek1Q8BZX4 494 aaKnown RBP16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Ifi205aQ8CGE8 404 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Traf3ip2Q8N7N6 555 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 E2f4Q8R0K9 410 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Lrrc3bQ8VCH9 259 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Olfr385Q8VGT1 312 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Sh3d19Q91X43 789 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Pcdha1Q91Y21 948 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Prpf6Q91YR7 941 aaKnown RBP16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 PirQ9D711 290 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Cst12Q9DAN8 128 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Asb3Q9WV72 525 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 GsdmeQ9Z2D3 512 aa16.45■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Igkv10-94A0A075B5L1 115 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Ptpn3A2ALK8 913 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Trappc3O55013 180 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 CtssO70370 340 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Zfy1P10925 782 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Hmga1P17095 107 aaKnown RBP16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Gja4P28235 333 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Fubp3Q3TIX6 575 aaKnown RBP16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 MslnQ61468 625 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Rbm12b2Q66JV4 834 aaKnown RBP16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Adam29Q811Q4 763 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Rspo4Q8BJ73 228 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Lig4Q8BTF7 911 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Trim9Q8C7M3 817 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Cog3Q8CI04 820 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Reep2Q8VCD6 254 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 TrabdQ99JY4 376 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Necab3Q9D6J4 353 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Il18rapQ9Z2B1 614 aa16.44■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Opn1mwO35599 359 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Eif3dO70194 548 aaKnown RBP16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 PfklP12382 780 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Irf7P70434 457 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Prss48Q14B25 312 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Nudt18Q3U2V3 323 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Ccdc61Q3UJV1 511 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 HecaQ3V1N5 544 aaKnown RBP16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Tbc1d12Q6A039 696 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Pcdhb14Q6PB90 796 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 EmsyQ8BMB0 1264 aaKnown RBP16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Leg1Q8C6C9 337 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Mms19Q9D071 1031 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Gstt4Q9D4P7 240 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Ndrg2Q9QYG0 371 aaKnown RBP16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Trpc3Q9QZC1 836 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Apobec2Q9WV35 224 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Elf4Q9Z2U4 655 aa16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 BptfA2A654 3036 aaKnown RBP16.43■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Sycp2lA0A0M3U1B0 842 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Gm18336A0A140LIU8 765 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Klhl41A2AUC9 606 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 AfmO89020 608 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Gnl1P36916 607 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Limk1P53668 647 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Mapre1Q61166 268 aaKnown RBP16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Cyp3a16Q64481 504 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Klhl23Q6GQU2 558 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Ccdc66Q6NS45 935 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Cct8l1Q80YT3 562 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Zdhhc19Q810M5 347 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Fam163bQ8BUM6 167 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Pyhin1Q8BV49 420 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Ccdc122Q8BVN0 290 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Wdr27Q8C5V5 780 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Hip1Q8VD75 1029 aaKnown RBP16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 EdaraddQ8VHX2 208 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Znf622Q91VY9 476 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 AdprmQ99KS6 340 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Marc1Q9CW42 340 aa16.42■□□□□ 0.22
Sf3b6-201ENSMUST00000046207 Cyp2c55Q9D816 490 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms