RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Trove2O08848 538 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rag1P15919 1040 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Stmn1P54227 149 aaKnown RBP20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Runx2Q08775 607 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Ifnl2Q4VK74 193 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Acvrl1Q61288 502 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 WlsQ6DID7 541 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Lamtor4Q8CF66 99 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Lonp1Q8CGK3 949 aaKnown RBP20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Cog3Q8CI04 820 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Mcoln2Q8K595 566 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Setd6Q9CWY3 473 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Med10Q9CXU0 135 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 MlklQ9D2Y4 472 aa20.74■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 PhipQ8VDD9 1821 aaKnown RBP20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Scgb2b21A0A087WQA9 112 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Vmn2r59E9PUT5 865 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 F6Y6L6 278 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Anxa8O35640 327 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 CfhP06909 1234 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 LeprP48356 1162 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rcn1Q05186 325 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Tmem63bQ3TWI9 832 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Lrch2Q3UMG5 773 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Itga1Q3V3R4 1179 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 LbpQ61805 481 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Cd180Q62192 661 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 HomezQ80W88 542 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Fbxo44Q8BK26 255 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Kctd12bQ8C7J6 292 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 FktnQ8R507 461 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Lars2Q8VDC0 902 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Fbxo33Q8VE08 562 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Kdelr1Q99JH8 212 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Mrps22Q9CXW2 359 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Mocs3A2BDX3 460 aaKnown RBP20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rgsl1H3BL40 1073 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Fignl2J3QK54 644 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 IapP03975 557 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Ccndbp1Q3TVC7 356 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Ccdc110Q3V125 848 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rab34Q64008 259 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Mical2Q8BML1 960 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Adgrg2Q8CJ12 1009 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Ero1aQ8R180 464 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Pcdha10Q91Y20 946 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Gpihbp1Q9D1N2 228 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Nr1h3Q9Z0Y9 445 aa20.73■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Slfn8B1ARD8 910 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Gm6583E9Q8Z1 469 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Dusp8O09112 663 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 FlgP11088 336 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Arl4cP61208 192 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Serpinb1cQ5SV42 375 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Atg9bQ6EBV9 922 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 PrcpQ7TMR0 491 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Glra2Q7TNC8 452 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Klhl29Q80T74 875 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Syt15Q8C6N3 418 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Igf2bp3Q9CPN8 579 aaKnown RBP20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rnf138rt1Q9D9M9 248 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Tmod4Q9JLH8 345 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Robo3Q9Z2I4 1366 aa20.72■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rpl21O09167 160 aaKnown RBP20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 EdnrbP48302 442 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Mxi1P50540 228 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Psmc1P62192 440 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 PhbP67778 272 aaKnown RBP20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Cdca2Q14B71 982 aaKnown RBP20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Grid1Q61627 1009 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Znf879Q8BI99 563 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Inpp5fQ8CDA1 1132 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 RnpepQ8VCT3 650 aaKnown RBP20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Plcb4Q91UZ1 1175 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Trpv6Q91WD2 767 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Pcdhb3Q91XZ7 784 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Kifc1Q9QWT9 674 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Siah3B2RWG3 268 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Tatdn2B7ZNL9 783 aaKnown RBP20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Unc5cO08747 931 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 PrlP06879 226 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Hoxb8P09632 243 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Gabrb2P63137 512 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Pou2f2Q00196 463 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Tfdp1Q08639 410 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 FcgrtQ61559 365 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Znf185Q62394 352 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Klhdc10Q6PAR0 439 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 N4bp3Q8C7U1 537 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Smtnl2Q8CI12 456 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Adi1Q99JT9 179 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Terb2Q9D494 218 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 1700013H16RikQ9DAC5 291 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Plscr2Q9DCW2 307 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Rsc1a1Q9ER99 582 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Psmg1Q9JK23 289 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Pdcd7Q9WTY1 482 aa20.71■□□□□ 0.91
Ccdc34-201ENSMUST00000028580 Olfr1305A2AVW3 312 aa20.7■□□□□ 0.9
Ccdc34-201ENSMUST00000028580 Ssxb9A2BI93 185 aa20.7■□□□□ 0.9
Ccdc34-201ENSMUST00000028580 Svs3aF2Z472 265 aa20.7■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms