RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Tdrd1Q99MV1 1172 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mettl16Q9CQG2 553 aaKnown RBP16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tgm5Q9D7I9 724 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Arl10Q9QXJ4 243 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 TroapB7ZNG4 668 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ccdc13D3YV10 709 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Bmpr2O35607 1038 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rnf216P58283 853 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Erbb2P70424 1256 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Fam8a1Q3URQ4 399 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Garnl3Q3V0G7 1038 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm14685Q52KH6 695 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Esyt3Q5DTI8 891 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Kif11Q6P9P6 1052 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gpr151Q7TSN6 422 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Camta2Q80Y50 1208 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mrps22Q9CXW2 359 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cul2Q9D4H8 745 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cables1Q9ESJ1 568 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Crlf3Q9Z2L7 442 aa16.99■□□□□ 0.31
Trim28-201ENSMUST00000005705 Bfsp1A2AMT1 669 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ccnyl1D3YUJ3 367 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Galnt4O08832 578 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Nat8lQ3UGX3 299 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Snx19Q6P4T1 997 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zfp454Q80Y34 536 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Sec24bQ80ZX0 1251 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ttc39bQ8BYY4 617 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 OafQ8QZR4 282 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Sec63Q8VHE0 760 aaKnown RBP16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rabep2Q91WG2 554 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gins2Q9D600 185 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Slc22a3Q9WTW5 551 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Srsf11E9Q6E5 511 aaKnown RBP16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mark2Q05512 776 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Lrrn4clQ3TYX2 239 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Atxn7l3bQ3UD01 97 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Hipk4Q3V016 616 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Shroom1Q5SX79 823 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Prpf38bQ80SY5 542 aaKnown RBP16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tor1aip2Q8BYU6 502 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Lman1lQ8VCD3 505 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ier5lQ99J55 406 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zfp64Q99KE8 643 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Chmp2aQ9DB34 222 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Kifc5bE9PUA5 672 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Krt90E9Q1Z0 538 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mark3Q03141 753 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Sult1d1Q3UZZ6 295 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm5168Q4KL04 211 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Grik1Q60934 836 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Xlr3cQ61806 226 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cyp3a16Q64481 504 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mysm1Q69Z66 819 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Fnip2Q80TD3 1108 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Slc9a9Q8BZ00 644 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Snx30Q8CE50 437 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Pcdhac2Q91Y09 1006 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rex1bdQ9CYZ6 169 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tomm20lQ9D4V6 152 aa16.98■□□□□ 0.31
Trim28-201ENSMUST00000005705 Myh9Q8VDD5 1960 aaKnown RBP16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zscan4-ps1A0A1C7CYV3 506 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zscan4dA7KBS4 506 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Lonrf1D3YY23 762 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 AmhP27106 555 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Cav1P49817 178 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 NrlP54846 237 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Stmn2P55821 179 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zscan4fQ3URS2 506 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Atp4aQ64436 1033 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Capn3Q64691 821 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Zscan4cQ80VJ6 506 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mical2Q8BML1 960 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 EtnpplQ8BWU8 499 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 OlahQ8R197 265 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Ubxn2aQ99KJ0 258 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 1700013H16RikQ9DAC5 291 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Akr1e2Q9DCT1 301 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rnf25Q9QZR0 456 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gabbr1Q9WV18 960 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gm9774A0A0A6YVU8 407 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Mfsd4b4J3QNS5 503 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 KitP05532 979 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Scarf2P59222 833 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Casp7P97864 303 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 ZufspQ3T9Z9 577 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tars2Q3UQ84 723 aaKnown RBP16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Nudt16Q6P3D0 195 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Olfr670Q7TRP3 312 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Usp37Q8C0R0 979 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 CntrobQ8CB62 887 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Clip4Q8CI96 704 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Rpp40Q8R1F9 363 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tssk3Q9D2E1 268 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Subh2bvQ9D9Z7 123 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Maged2Q9ER67 616 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Slc13a1Q9JHI4 594 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Gadd45gQ9Z111 159 aa16.97■□□□□ 0.31
Trim28-201ENSMUST00000005705 Lrrc10bG3XA50 292 aa16.96■□□□□ 0.31
Trim28-201ENSMUST00000005705 Tekt5G5E8A8 557 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms