RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W OTU1P43558 301 aa0.14□□□□□ -2.39
SEC8YPR055W YFH7P43591 353 aa0.14□□□□□ -2.39
SEC8YPR055W YJL009WP47078 108 aa0.14□□□□□ -2.39
SEC8YPR055W YAE1P47118 141 aaPredicted RBP0.14□□□□□ -2.39
SEC8YPR055W RTC4P53850 401 aa0.14□□□□□ -2.39
SEC8YPR055W YNG1Q08465 219 aa0.14□□□□□ -2.39
SEC8YPR055W MDM35O60200 86 aa0.14□□□□□ -2.39
SEC8YPR055W COX8P04039 78 aa0.14□□□□□ -2.39
SEC8YPR055W YJL197C-AP0C5P0 93 aa0.14□□□□□ -2.39
SEC8YPR055W COQ1P18900 473 aa0.14□□□□□ -2.39
SEC8YPR055W BUB2P26448 306 aaPredicted RBP0.14□□□□□ -2.39
SEC8YPR055W PAN3P36102 679 aaPredicted RBP0.14□□□□□ -2.39
SEC8YPR055W PDX3P38075 228 aaKnown RBP0.14□□□□□ -2.39
SEC8YPR055W PDS1P40316 373 aaPredicted RBP0.14□□□□□ -2.39
SEC8YPR055W EMC4P53073 190 aa0.14□□□□□ -2.39
SEC8YPR055W YGR164WP53291 111 aa0.14□□□□□ -2.39
SEC8YPR055W COG5P53951 403 aa0.14□□□□□ -2.39
SEC8YPR055W AIM36Q03798 255 aa0.14□□□□□ -2.39
SEC8YPR055W YLR036CQ07986 203 aa0.14□□□□□ -2.39
SEC8YPR055W PAM17P36147 197 aa0.13□□□□□ -2.39
SEC8YPR055W ICS3P47034 131 aa0.13□□□□□ -2.39
SEC8YPR055W MPC1P53157 130 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W GET1P53192 235 aa0.13□□□□□ -2.39
SEC8YPR055W YLR460CP54007 376 aa0.13□□□□□ -2.39
SEC8YPR055W HNT1Q04344 158 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W RNH202Q05635 350 aa0.13□□□□□ -2.39
SEC8YPR055W BRX1Q08235 291 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W LAA1P39526 2014 aa0.13□□□□□ -2.39
SEC8YPR055W RFA3P26755 122 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W HMF1P40037 129 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W YNL200CP40165 246 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W RFC4P40339 323 aaKnown RBP0.13□□□□□ -2.39
SEC8YPR055W MOB1P40484 314 aa0.13□□□□□ -2.39
SEC8YPR055W ALB1P47019 175 aaPredicted RBP0.13□□□□□ -2.39
SEC8YPR055W GEP7P53171 287 aa0.13□□□□□ -2.39
SEC8YPR055W CWC27Q02770 301 aa0.13□□□□□ -2.39
SEC8YPR055W YMR007WQ03675 126 aa0.13□□□□□ -2.39
SEC8YPR055W YLR412C-AQ3E742 68 aa0.13□□□□□ -2.39
SEC8YPR055W PRE1P22141 198 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W OCH1P31755 480 aa0.12□□□□□ -2.39
SEC8YPR055W CAF4P36130 643 aa0.12□□□□□ -2.39
SEC8YPR055W MSS2P40990 351 aa0.12□□□□□ -2.39
SEC8YPR055W YGR025WP53216 100 aa0.12□□□□□ -2.39
SEC8YPR055W PIR1Q03178 341 aa0.12□□□□□ -2.39
SEC8YPR055W GRX3Q03835 250 aa0.12□□□□□ -2.39
SEC8YPR055W YOR097CQ12274 175 aaPredicted RBP0.12□□□□□ -2.39
SEC8YPR055W YML100W-AQ8TGT0 57 aa0.12□□□□□ -2.39
SEC8YPR055W IGO2Q9P305 131 aa0.12□□□□□ -2.39
SEC8YPR055W AHT1P29589 182 aa0.12□□□□□ -2.39
SEC8YPR055W SHE2P36068 246 aaKnown RBP RIP-Chip data0.12□□□□□ -2.39not detected
SEC8YPR055W EDC3P39998 551 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W YER034WP40022 185 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W ERG10P41338 398 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W IRC18P47056 224 aa0.12□□□□□ -2.39
SEC8YPR055W YJR111CP47148 283 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W VPS28Q02767 242 aa0.12□□□□□ -2.39
SEC8YPR055W YLR046CQ12253 270 aa0.12□□□□□ -2.39
SEC8YPR055W HUT1Q12520 339 aa0.12□□□□□ -2.39
SEC8YPR055W COX19Q3E731 98 aa0.12□□□□□ -2.39
SEC8YPR055W RPO41P13433 1351 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W HTB1P02293 131 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W HTB2P02294 131 aa0.12□□□□□ -2.39
SEC8YPR055W MATALPHA2P0CY08 210 aa0.12□□□□□ -2.39
SEC8YPR055W HMLALPHA2P0CY09 210 aa0.12□□□□□ -2.39
SEC8YPR055W MAG1P22134 296 aaKnown RBP0.12□□□□□ -2.39
SEC8YPR055W PEX34P25584 144 aa0.12□□□□□ -2.39
SEC8YPR055W IKI1P38874 309 aa0.12□□□□□ -2.39
SEC8YPR055W YEA4P40004 342 aa0.12□□□□□ -2.39
SEC8YPR055W PRP11Q07350 266 aaPredicted RBP0.12□□□□□ -2.39
SEC8YPR055W FYV12Q08559 129 aa0.12□□□□□ -2.39
SEC8YPR055W COA3Q3E7B2 85 aa0.12□□□□□ -2.39
SEC8YPR055W ODC2Q99297 307 aa0.12□□□□□ -2.39
SEC8YPR055W PRP8P33334 2413 aaKnown RBP0.11□□□□□ -2.39
SEC8YPR055W YRA2P36036 203 aaKnown RBP RIP-Chip data0.11□□□□□ -2.39not detected
SEC8YPR055W YHL042WP38729 150 aa0.11□□□□□ -2.39
SEC8YPR055W SER2P42941 309 aa0.11□□□□□ -2.39
SEC8YPR055W SNO1Q03144 224 aa0.11□□□□□ -2.39
SEC8YPR055W UPS3Q04006 179 aa0.11□□□□□ -2.39
SEC8YPR055W ADF1Q2V2Q1 113 aa0.11□□□□□ -2.39
SEC8YPR055W MBF1O14467 151 aaKnown RBP0.11□□□□□ -2.39
SEC8YPR055W YCR090CP25654 182 aaKnown RBP0.11□□□□□ -2.39
SEC8YPR055W MGT1P26188 188 aa0.11□□□□□ -2.39
SEC8YPR055W YRB1P41920 201 aaKnown RBP0.11□□□□□ -2.39
SEC8YPR055W GPI14P47088 403 aaKnown RBP0.11□□□□□ -2.39
SEC8YPR055W YNL033WP53964 284 aa0.11□□□□□ -2.39
SEC8YPR055W YMR295CQ03559 197 aa0.11□□□□□ -2.39
SEC8YPR055W YOL024WQ08172 172 aa0.11□□□□□ -2.39
SEC8YPR055W PST2Q12335 198 aaKnown RBP0.11□□□□□ -2.39
SEC8YPR055W YAR023CD6VPM8 179 aa0.1□□□□□ -2.39
SEC8YPR055W MRS1P07266 363 aa0.1□□□□□ -2.39
SEC8YPR055W RPB4P20433 221 aaPredicted RBP0.1□□□□□ -2.39
SEC8YPR055W RPB7P34087 171 aa0.1□□□□□ -2.39
SEC8YPR055W CUP9P41817 306 aa0.1□□□□□ -2.39
SEC8YPR055W YFL051CP43552 160 aa0.1□□□□□ -2.39
SEC8YPR055W TMA22P47089 198 aaPredicted RBP0.1□□□□□ -2.39
SEC8YPR055W YMR253CQ04835 414 aa0.1□□□□□ -2.39
SEC8YPR055W YCL012CQ8J0M4 134 aa0.1□□□□□ -2.39
SEC8YPR055W MAK5P38112 773 aaPredicted RBP0.1□□□□□ -2.39
SEC8YPR055W ECM31P38122 312 aa0.1□□□□□ -2.39
SEC8YPR055W THG1P53215 237 aaKnown RBP0.1□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 161.7 ms