RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W DDI2P0CH63 225 aa4.88□□□□□ -1.63
CIT3YPR001W DDI3P0CH64 225 aa4.88□□□□□ -1.63
CIT3YPR001W HSP12P22943 109 aaKnown RBP4.88□□□□□ -1.63
CIT3YPR001W DUR1,2P32528 1835 aaKnown RBP4.87□□□□□ -1.63
CIT3YPR001W ADK1P07170 222 aaKnown RBP4.87□□□□□ -1.63
CIT3YPR001W PCL1P24867 279 aa4.87□□□□□ -1.63
CIT3YPR001W BUD23P25627 275 aaPredicted RBP4.87□□□□□ -1.63
CIT3YPR001W YBL010CP32788 280 aa4.87□□□□□ -1.63
CIT3YPR001W SMD3P43321 101 aaKnown RBP4.87□□□□□ -1.63
CIT3YPR001W YMR295CQ03559 197 aa4.87□□□□□ -1.63
CIT3YPR001W ATP20Q12233 115 aa4.87□□□□□ -1.63
CIT3YPR001W HSL1P34244 1518 aa4.86□□□□□ -1.63
CIT3YPR001W MSW1P04803 379 aa4.86□□□□□ -1.63
CIT3YPR001W HIS3P06633 220 aa4.86□□□□□ -1.63
CIT3YPR001W YEL028WP39989 153 aa4.86□□□□□ -1.63
CIT3YPR001W CUP9P41817 306 aa4.86□□□□□ -1.63
CIT3YPR001W YOR268CQ08734 132 aa4.86□□□□□ -1.63
CIT3YPR001W FSF1Q12029 327 aaKnown RBP4.86□□□□□ -1.63
CIT3YPR001W MYO2P19524 1574 aaKnown RBP4.86□□□□□ -1.63
CIT3YPR001W MLP2P40457 1679 aa4.86□□□□□ -1.63
CIT3YPR001W YKR070WP36151 352 aaKnown RBP4.85□□□□□ -1.63
CIT3YPR001W SPC25P40014 221 aa4.85□□□□□ -1.63
CIT3YPR001W YDR102CQ03864 110 aa4.85□□□□□ -1.63
CIT3YPR001W FCF2Q12035 217 aaPredicted RBP4.85□□□□□ -1.63
CIT3YPR001W UBR1P19812 1950 aa4.84□□□□□ -1.63
CIT3YPR001W YKR032WP36127 104 aa4.84□□□□□ -1.63
CIT3YPR001W RPS12P48589 143 aaKnown RBP4.84□□□□□ -1.63
CIT3YPR001W YNR062CP53748 327 aa4.84□□□□□ -1.63
CIT3YPR001W GEP7P53171 287 aa4.83□□□□□ -1.64
CIT3YPR001W MID2P36027 376 aa4.82□□□□□ -1.64
CIT3YPR001W EMC4P53073 190 aa4.82□□□□□ -1.64
CIT3YPR001W SHH3Q04487 196 aa4.82□□□□□ -1.64
CIT3YPR001W ANT1Q06497 328 aa4.82□□□□□ -1.64
CIT3YPR001W TY1B-DR4Q07793 1604 aa4.82□□□□□ -1.64
CIT3YPR001W EAF6P47128 113 aa4.81□□□□□ -1.64
CIT3YPR001W MPC3P53311 146 aa4.81□□□□□ -1.64
CIT3YPR001W ELC1Q03071 99 aa4.81□□□□□ -1.64
CIT3YPR001W PIN3Q06449 215 aa4.81□□□□□ -1.64
CIT3YPR001W GEA1P47102 1408 aaPredicted RBP4.81□□□□□ -1.64
CIT3YPR001W DDR48P18899 430 aaKnown RBP4.81□□□□□ -1.64
CIT3YPR001W ETR1P38071 380 aa4.81□□□□□ -1.64
CIT3YPR001W RRT1P38192 103 aa4.81□□□□□ -1.64
CIT3YPR001W YER135CP40082 130 aa4.81□□□□□ -1.64
CIT3YPR001W YFL012WP43580 148 aa4.81□□□□□ -1.64
CIT3YPR001W DNA2P38859 1522 aa4.81□□□□□ -1.64
CIT3YPR001W SPT6P23615 1451 aaKnown RBP4.8□□□□□ -1.64
CIT3YPR001W YNR064CP53750 290 aa4.8□□□□□ -1.64
CIT3YPR001W TVP18Q04767 167 aa4.8□□□□□ -1.64
CIT3YPR001W ZEO1Q08245 113 aa4.8□□□□□ -1.64
CIT3YPR001W YPR063CQ12160 140 aa4.8□□□□□ -1.64
CIT3YPR001W YER039C-AP0CD97 72 aa4.79□□□□□ -1.64
CIT3YPR001W HSP26P15992 214 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
CIT3YPR001W RIO2P40160 425 aaKnown RBP4.79□□□□□ -1.64
CIT3YPR001W HAL1Q01766 294 aa4.79□□□□□ -1.64
CIT3YPR001W RRT7Q07829 113 aa4.79□□□□□ -1.64
CIT3YPR001W KTI11Q3E840 82 aa4.79□□□□□ -1.64
CIT3YPR001W TSC11P40061 1430 aa4.79□□□□□ -1.64
CIT3YPR001W SIN3P22579 1536 aa4.78□□□□□ -1.64
CIT3YPR001W STU1P38198 1513 aa4.78□□□□□ -1.64
CIT3YPR001W SPS2P08459 502 aa4.78□□□□□ -1.64
CIT3YPR001W GPA2P10823 449 aa4.78□□□□□ -1.64
CIT3YPR001W ANB1P19211 157 aa4.78□□□□□ -1.64
CIT3YPR001W YOR062CP36025 268 aa4.78□□□□□ -1.64
CIT3YPR001W YEL073CP39974 107 aa4.78□□□□□ -1.64
CIT3YPR001W DOC1P53068 250 aa4.78□□□□□ -1.64
CIT3YPR001W LIP1Q03579 150 aa4.78□□□□□ -1.64
CIT3YPR001W HUT1Q12520 339 aa4.78□□□□□ -1.64
CIT3YPR001W YLR422WQ06409 1932 aa4.77□□□□□ -1.65
CIT3YPR001W PAM17P36147 197 aa4.77□□□□□ -1.65
CIT3YPR001W PHS1P40857 217 aa4.77□□□□□ -1.65
CIT3YPR001W RNH202Q05635 350 aa4.77□□□□□ -1.65
CIT3YPR001W SCC2Q04002 1493 aa4.77□□□□□ -1.65
CIT3YPR001W GCN2P15442 1659 aa4.76□□□□□ -1.65
CIT3YPR001W YEL045CP32616 141 aa4.76□□□□□ -1.65
CIT3YPR001W YPT31P38555 223 aaKnown RBP4.76□□□□□ -1.65
CIT3YPR001W YHR180WP38868 163 aa4.76□□□□□ -1.65
CIT3YPR001W RPB11P38902 120 aa4.76□□□□□ -1.65
CIT3YPR001W YCL001W-BQ96VH2 84 aa4.76□□□□□ -1.65
CIT3YPR001W MRS4P23500 304 aa4.75□□□□□ -1.65
CIT3YPR001W FZF1P32805 299 aa4.75□□□□□ -1.65
CIT3YPR001W SPG1P50088 95 aa4.75□□□□□ -1.65
CIT3YPR001W SML1Q04964 104 aa4.75□□□□□ -1.65
CIT3YPR001W NOP1P15646 327 aaKnown RBP4.75□□□□□ -1.65
CIT3YPR001W YET1P35723 206 aa4.75□□□□□ -1.65
CIT3YPR001W SFT2P38166 215 aa4.75□□□□□ -1.65
CIT3YPR001W YLR042CQ07990 161 aa4.75□□□□□ -1.65
CIT3YPR001W REV3P14284 1504 aa4.74□□□□□ -1.65
CIT3YPR001W YNL217WP40152 326 aa4.74□□□□□ -1.65
CIT3YPR001W GRX5Q02784 150 aa4.74□□□□□ -1.65
CIT3YPR001W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
CIT3YPR001W SWR1Q05471 1514 aa4.73□□□□□ -1.65
CIT3YPR001W VAR1P02381 398 aa4.73□□□□□ -1.65
CIT3YPR001W PAC10P48363 199 aa4.73□□□□□ -1.65
CIT3YPR001W RIM9Q04734 239 aa4.73□□□□□ -1.65
CIT3YPR001W ATG10Q07879 167 aa4.73□□□□□ -1.65
CIT3YPR001W IRC23Q08416 157 aa4.73□□□□□ -1.65
CIT3YPR001W MDH2P22133 377 aa4.72□□□□□ -1.65
CIT3YPR001W MOB1P40484 314 aa4.72□□□□□ -1.65
CIT3YPR001W GAT4P40569 121 aa4.72□□□□□ -1.65
CIT3YPR001W PIR5P46999 287 aa4.72□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms