RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W SNO1Q03144 224 aa3.56□□□□□ -1.84
SSO1YPL232W MSH5Q12175 901 aa3.56□□□□□ -1.84
SSO1YPL232W AYT1Q12226 474 aa3.56□□□□□ -1.84
SSO1YPL232W SCM3Q12334 223 aa3.56□□□□□ -1.84
SSO1YPL232W TMA17Q12513 150 aa3.56□□□□□ -1.84
SSO1YPL232W RPL11AP0C0W9 174 aaKnown RBP3.55□□□□□ -1.84
SSO1YPL232W TY1A-LR4P0C2I8 440 aaKnown RBP3.55□□□□□ -1.84
SSO1YPL232W TY1A-DR6P0CX70 440 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-ER1P0CX71 440 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-LR2P0CX72 440 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-PLP0CX73 440 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-JR1P0CX74 440 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-LR3P0CX75 440 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-ML2P0CX76 440 aa3.55□□□□□ -1.84
SSO1YPL232W YKL162CP36052 402 aa3.55□□□□□ -1.84
SSO1YPL232W ELF1P36053 145 aa3.55□□□□□ -1.84
SSO1YPL232W YHR022CP38763 256 aa3.55□□□□□ -1.84
SSO1YPL232W PRE5P40302 234 aaKnown RBP3.55□□□□□ -1.84
SSO1YPL232W SPC1P46965 94 aa3.55□□□□□ -1.84
SSO1YPL232W TOM7P53507 60 aa3.55□□□□□ -1.84
SSO1YPL232W CPR8P53728 308 aa3.55□□□□□ -1.84
SSO1YPL232W ENV7Q12003 364 aa3.55□□□□□ -1.84
SSO1YPL232W TY1A-GR1Q12085 440 aa3.55□□□□□ -1.84
SSO1YPL232W YCT1Q12235 531 aa3.55□□□□□ -1.84
SSO1YPL232W RPL11BQ3E757 174 aaPredicted RBP3.55□□□□□ -1.84
SSO1YPL232W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.55□□□□□ -1.84
SSO1YPL232W TY1A-OLQ92392 440 aaKnown RBP3.55□□□□□ -1.84
SSO1YPL232W FCY2P17064 533 aa3.54□□□□□ -1.84
SSO1YPL232W MBA1P38300 278 aa3.54□□□□□ -1.84
SSO1YPL232W YPS5P53057 165 aa3.54□□□□□ -1.84
SSO1YPL232W NIF3P53081 288 aa3.54□□□□□ -1.84
SSO1YPL232W VPS28Q02767 242 aa3.54□□□□□ -1.84
SSO1YPL232W PBA1Q05778 276 aa3.54□□□□□ -1.84
SSO1YPL232W COA4Q05809 96 aa3.54□□□□□ -1.84
SSO1YPL232W NGL1Q08213 363 aaKnown RBP3.54□□□□□ -1.84
SSO1YPL232W YPL264CQ08980 353 aa3.54□□□□□ -1.84
SSO1YPL232W YLL066W-BQ8TGJ7 56 aa3.54□□□□□ -1.84
SSO1YPL232W SEC22P22214 214 aa3.53□□□□□ -1.84
SSO1YPL232W MRPL3P36516 390 aa3.53□□□□□ -1.84
SSO1YPL232W SFT2P38166 215 aa3.53□□□□□ -1.84
SSO1YPL232W HPA3P39979 161 aa3.53□□□□□ -1.84
SSO1YPL232W YIL077CP40508 320 aa3.53□□□□□ -1.84
SSO1YPL232W CDC40P40968 455 aaPredicted RBP3.53□□□□□ -1.84
SSO1YPL232W AIM25P47140 327 aa3.53□□□□□ -1.84
SSO1YPL232W PEX27Q08580 376 aa3.53□□□□□ -1.84
SSO1YPL232W USV1Q12132 391 aa3.53□□□□□ -1.84
SSO1YPL232W ERV2Q12284 196 aa3.53□□□□□ -1.84
SSO1YPL232W DFM1Q12743 341 aaKnown RBP3.53□□□□□ -1.84
SSO1YPL232W YGR240C-AQ3E786 66 aa3.53□□□□□ -1.84
SSO1YPL232W YMR316C-AI2HB70 103 aa3.52□□□□□ -1.85
SSO1YPL232W YJR096WP47137 282 aa3.52□□□□□ -1.85
SSO1YPL232W RBL2P48606 106 aaKnown RBP3.52□□□□□ -1.85
SSO1YPL232W PKP2P53170 491 aa3.52□□□□□ -1.85
SSO1YPL232W ATP23P53722 227 aa3.52□□□□□ -1.85
SSO1YPL232W ODC1Q03028 310 aa3.52□□□□□ -1.85
SSO1YPL232W LSM2P38203 95 aaKnown RBP3.51□□□□□ -1.85
SSO1YPL232W ATG27P46989 271 aa3.51□□□□□ -1.85
SSO1YPL232W DSK2P48510 373 aa3.51□□□□□ -1.85
SSO1YPL232W POM34Q12445 299 aa3.51□□□□□ -1.85
SSO1YPL232W AIM45Q12480 344 aaKnown RBP3.51□□□□□ -1.85
SSO1YPL232W YPR145C-AQ2V2P0 78 aa3.51□□□□□ -1.85
SSO1YPL232W CYC1P00044 109 aaPredicted RBP3.5□□□□□ -1.85
SSO1YPL232W DFR1P07807 211 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SSO1YPL232W RPS25BP0C0T4 108 aaKnown RBP3.5□□□□□ -1.85
SSO1YPL232W YCR016WP25617 290 aaKnown RBP3.5□□□□□ -1.85
SSO1YPL232W EMP24P32803 203 aaKnown RBP3.5□□□□□ -1.85
SSO1YPL232W TIR2P33890 251 aa3.5□□□□□ -1.85
SSO1YPL232W SHB17P36136 271 aaKnown RBP3.5□□□□□ -1.85
SSO1YPL232W ASP1P38986 381 aaPredicted RBP3.5□□□□□ -1.85
SSO1YPL232W PDR17P53844 350 aa3.5□□□□□ -1.85
SSO1YPL232W YIF1P53845 314 aaKnown RBP3.5□□□□□ -1.85
SSO1YPL232W MGR3Q04472 501 aa3.5□□□□□ -1.85
SSO1YPL232W HTZ1Q12692 134 aaKnown RBP3.5□□□□□ -1.85
SSO1YPL232W RPS25AQ3E792 108 aaPredicted RBP3.5□□□□□ -1.85
SSO1YPL232W COA2Q3E823 68 aa3.5□□□□□ -1.85
SSO1YPL232W YOL085CQ99345 113 aa3.5□□□□□ -1.85
SSO1YPL232W RTC6O14464 93 aa3.49□□□□□ -1.85
SSO1YPL232W TPI1P00942 248 aaKnown RBP3.49□□□□□ -1.85
SSO1YPL232W VAR1P02381 398 aa3.49□□□□□ -1.85
SSO1YPL232W DDI2P0CH63 225 aa3.49□□□□□ -1.85
SSO1YPL232W DDI3P0CH64 225 aa3.49□□□□□ -1.85
SSO1YPL232W PET100P38958 111 aa3.49□□□□□ -1.85
SSO1YPL232W JLP2P40206 208 aa3.49□□□□□ -1.85
SSO1YPL232W MIC27P50945 234 aa3.49□□□□□ -1.85
SSO1YPL232W YMR090WQ04304 227 aaKnown RBP3.49□□□□□ -1.85
SSO1YPL232W RNA15P25299 296 aaPredicted RBP3.48□□□□□ -1.85
SSO1YPL232W PPQ1P32945 549 aa3.48□□□□□ -1.85
SSO1YPL232W SPI1P40092 148 aa3.48□□□□□ -1.85
SSO1YPL232W SAS2P40963 338 aa3.48□□□□□ -1.85
SSO1YPL232W YJL028WP47062 111 aa3.48□□□□□ -1.85
SSO1YPL232W YDL183CP48569 320 aa3.48□□□□□ -1.85
SSO1YPL232W YNR071CP53757 342 aa3.48□□□□□ -1.85
SSO1YPL232W BOR1P53838 576 aa3.48□□□□□ -1.85
SSO1YPL232W TMA23Q03525 211 aa3.48□□□□□ -1.85
SSO1YPL232W PHO92Q06390 306 aa3.48□□□□□ -1.85
SSO1YPL232W YLR302CO13544 120 aa3.47□□□□□ -1.85
SSO1YPL232W YDR034C-AP0C289 58 aa3.47□□□□□ -1.85
SSO1YPL232W SUA5P32579 426 aa3.47□□□□□ -1.85
SSO1YPL232W MBB1P39534 108 aa3.47□□□□□ -1.85
SSO1YPL232W SWM2P40342 146 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms