RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C NQM1P53228 333 aaPredicted RBP1.31□□□□□ -2.2
CUP9YPL177C GRX5Q02784 150 aa1.31□□□□□ -2.2
CUP9YPL177C YOR015WQ12169 119 aa1.31□□□□□ -2.2
CUP9YPL177C YOR381W-AQ3E804 55 aa1.31□□□□□ -2.2
CUP9YPL177C PEX34P25584 144 aa1.3□□□□□ -2.2
CUP9YPL177C UBC8P28263 218 aa1.3□□□□□ -2.2
CUP9YPL177C GSP2P32836 220 aaKnown RBP1.3□□□□□ -2.2
CUP9YPL177C YDC1Q02896 317 aa1.3□□□□□ -2.2
CUP9YPL177C ATP5P09457 212 aa1.29□□□□□ -2.2
CUP9YPL177C PET54P10834 293 aa1.29□□□□□ -2.2
CUP9YPL177C RPL30P14120 105 aaKnown RBP1.29□□□□□ -2.2
CUP9YPL177C RPB7P34087 171 aa1.29□□□□□ -2.2
CUP9YPL177C YRA2P36036 203 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
CUP9YPL177C SRP102P36057 244 aaPredicted RBP1.29□□□□□ -2.2
CUP9YPL177C YEL073CP39974 107 aa1.29□□□□□ -2.2
CUP9YPL177C YEL028WP39989 153 aa1.29□□□□□ -2.2
CUP9YPL177C LSM1P47017 172 aaKnown RBP1.29□□□□□ -2.2
CUP9YPL177C PAC10P48363 199 aa1.29□□□□□ -2.2
CUP9YPL177C RPL37AP49166 88 aaKnown RBP1.29□□□□□ -2.2
CUP9YPL177C PIR1Q03178 341 aa1.29□□□□□ -2.2
CUP9YPL177C RIM9Q04734 239 aa1.29□□□□□ -2.2
CUP9YPL177C PST2Q12335 198 aaKnown RBP1.29□□□□□ -2.2
CUP9YPL177C MAK31P23059 88 aa1.28□□□□□ -2.2
CUP9YPL177C ACP1P32463 125 aa1.28□□□□□ -2.2
CUP9YPL177C FIP1P45976 327 aa1.28□□□□□ -2.2
CUP9YPL177C HHT1P61830 136 aa1.28□□□□□ -2.2
CUP9YPL177C DML1Q03652 475 aa1.28□□□□□ -2.2
CUP9YPL177C YDR102CQ03864 110 aa1.28□□□□□ -2.2
CUP9YPL177C PKR1Q03880 122 aaKnown RBP1.28□□□□□ -2.2
CUP9YPL177C UPS3Q04006 179 aa1.28□□□□□ -2.2
CUP9YPL177C YHP1Q04116 353 aa1.28□□□□□ -2.2
CUP9YPL177C SYM1Q06563 197 aa1.28□□□□□ -2.2
CUP9YPL177C TRM3Q07527 1436 aa1.28□□□□□ -2.2
CUP9YPL177C DUR1,2P32528 1835 aaKnown RBP1.28□□□□□ -2.2
CUP9YPL177C PTC1P35182 281 aa1.27□□□□□ -2.21
CUP9YPL177C HTD2P38790 280 aaKnown RBP1.27□□□□□ -2.21
CUP9YPL177C HUA1P40325 198 aa1.27□□□□□ -2.21
CUP9YPL177C MPM1P40364 252 aa1.27□□□□□ -2.21
CUP9YPL177C NSE4P43124 402 aa1.27□□□□□ -2.21
CUP9YPL177C ALB1P47019 175 aaPredicted RBP1.27□□□□□ -2.21
CUP9YPL177C RAV2Q03956 351 aa1.27□□□□□ -2.21
CUP9YPL177C RRP17Q04031 235 aaPredicted RBP1.27□□□□□ -2.21
CUP9YPL177C UPS1Q05776 175 aa1.27□□□□□ -2.21
CUP9YPL177C ATG41Q12048 136 aa1.27□□□□□ -2.21
CUP9YPL177C ACC1Q00955 2233 aaKnown RBP1.27□□□□□ -2.21
CUP9YPL177C IPI1P38803 334 aaPredicted RBP1.26□□□□□ -2.21
CUP9YPL177C YER181CP40097 107 aa1.26□□□□□ -2.21
CUP9YPL177C CCC1P47818 322 aa1.26□□□□□ -2.21
CUP9YPL177C LIP1Q03579 150 aa1.26□□□□□ -2.21
CUP9YPL177C YDR391CQ04170 232 aa1.26□□□□□ -2.21
CUP9YPL177C YPD1Q07688 167 aa1.26□□□□□ -2.21
CUP9YPL177C ATG10Q07879 167 aa1.26□□□□□ -2.21
CUP9YPL177C YPT31P38555 223 aaKnown RBP1.25□□□□□ -2.21
CUP9YPL177C CCS1P40202 249 aaKnown RBP1.25□□□□□ -2.21
CUP9YPL177C YGL193CP53097 103 aa1.25□□□□□ -2.21
CUP9YPL177C YPR114WQ06107 315 aa1.25□□□□□ -2.21
CUP9YPL177C COA3Q3E7B2 85 aa1.25□□□□□ -2.21
CUP9YPL177C SPS2P08459 502 aa1.24□□□□□ -2.21
CUP9YPL177C YBL010CP32788 280 aa1.24□□□□□ -2.21
CUP9YPL177C MRPL24P36525 258 aaPredicted RBP1.24□□□□□ -2.21
CUP9YPL177C YNR064CP53750 290 aa1.24□□□□□ -2.21
CUP9YPL177C YMR320WQ04897 101 aa1.24□□□□□ -2.21
CUP9YPL177C YMR030W-AQ3E760 96 aa1.24□□□□□ -2.21
CUP9YPL177C STF2P16965 84 aa1.23□□□□□ -2.21
CUP9YPL177C MRS4P23500 304 aa1.23□□□□□ -2.21
CUP9YPL177C YAP3P38749 330 aa1.23□□□□□ -2.21
CUP9YPL177C MOB1P40484 314 aa1.23□□□□□ -2.21
CUP9YPL177C YJR015WP47090 510 aa1.23□□□□□ -2.21
CUP9YPL177C RBL2P48606 106 aaKnown RBP1.23□□□□□ -2.21
CUP9YPL177C MET31Q03081 177 aa1.23□□□□□ -2.21
CUP9YPL177C YML079WQ03629 201 aa1.23□□□□□ -2.21
CUP9YPL177C YMR007WQ03675 126 aa1.23□□□□□ -2.21
CUP9YPL177C ELP6Q04868 273 aa1.23□□□□□ -2.21
CUP9YPL177C HRD1Q08109 551 aa1.23□□□□□ -2.21
CUP9YPL177C UIP4Q08926 304 aa1.23□□□□□ -2.21
CUP9YPL177C YOR1P53049 1477 aa1.23□□□□□ -2.21
CUP9YPL177C INO4P13902 151 aa1.22□□□□□ -2.21
CUP9YPL177C SEN2P16658 377 aa1.22□□□□□ -2.21
CUP9YPL177C PHO13P19881 312 aa1.22□□□□□ -2.21
CUP9YPL177C ETR1P38071 380 aa1.22□□□□□ -2.21
CUP9YPL177C YJL218WP40892 196 aaKnown RBP1.22□□□□□ -2.21
CUP9YPL177C SPT14P32363 452 aa1.21□□□□□ -2.22
CUP9YPL177C YGR269WP40326 108 aa1.21□□□□□ -2.22
CUP9YPL177C GEP7P53171 287 aa1.21□□□□□ -2.22
CUP9YPL177C YDL241WQ07738 123 aa1.21□□□□□ -2.22
CUP9YPL177C TAR1Q8TGM6 124 aa1.21□□□□□ -2.22
CUP9YPL177C UBR1P19812 1950 aa1.21□□□□□ -2.22
CUP9YPL177C RPS25BP0C0T4 108 aaKnown RBP1.2□□□□□ -2.22
CUP9YPL177C DDR48P18899 430 aaKnown RBP1.2□□□□□ -2.22
CUP9YPL177C SRP21P32342 167 aa1.2□□□□□ -2.22
CUP9YPL177C GIM4P40005 111 aaKnown RBP1.2□□□□□ -2.22
CUP9YPL177C YGR201CP42936 225 aa1.2□□□□□ -2.22
CUP9YPL177C YDR366CP87287 132 aa1.2□□□□□ -2.22
CUP9YPL177C COF1Q03048 143 aaKnown RBP1.2□□□□□ -2.22
CUP9YPL177C SPC2Q04969 178 aa1.2□□□□□ -2.22
CUP9YPL177C RRT7Q07829 113 aa1.2□□□□□ -2.22
CUP9YPL177C RFU1Q08003 200 aa1.2□□□□□ -2.22
CUP9YPL177C YDL157CQ12082 118 aa1.2□□□□□ -2.22
CUP9YPL177C RPS25AQ3E792 108 aaPredicted RBP1.2□□□□□ -2.22
CUP9YPL177C RIF1P29539 1916 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms