RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C IMP2P46972 177 aa6.18□□□□□ -1.42
LSP1YPL004C CAX4P53223 239 aa6.18□□□□□ -1.42
LSP1YPL004C HST4P53688 370 aa6.18□□□□□ -1.42
LSP1YPL004C ATG39Q06159 398 aa6.18□□□□□ -1.42
LSP1YPL004C ERS1P17261 260 aa6.17□□□□□ -1.42
LSP1YPL004C MDM10P18409 493 aa6.17□□□□□ -1.42
LSP1YPL004C CDC50P25656 391 aa6.17□□□□□ -1.42
LSP1YPL004C SFT2P38166 215 aa6.17□□□□□ -1.42
LSP1YPL004C YBR292CP38357 123 aa6.17□□□□□ -1.42
LSP1YPL004C SNU13P39990 126 aaKnown RBP6.17□□□□□ -1.42
LSP1YPL004C ERV25P54837 211 aaKnown RBP6.17□□□□□ -1.42
LSP1YPL004C ODC1Q03028 310 aa6.17□□□□□ -1.42
LSP1YPL004C CTR3Q06686 241 aa6.17□□□□□ -1.42
LSP1YPL004C LDS2Q08218 356 aa6.17□□□□□ -1.42
LSP1YPL004C SPO13P23624 291 aa6.16□□□□□ -1.42
LSP1YPL004C ACP1P32463 125 aa6.16□□□□□ -1.42
LSP1YPL004C ECM33P38248 429 aaKnown RBP6.16□□□□□ -1.42
LSP1YPL004C DER1P38307 211 aa6.16□□□□□ -1.42
LSP1YPL004C PTC7P38797 343 aa6.16□□□□□ -1.42
LSP1YPL004C SNF11P38956 169 aa6.16□□□□□ -1.42
LSP1YPL004C CAF16P43569 289 aa6.16□□□□□ -1.42
LSP1YPL004C RIB4P50861 169 aaPredicted RBP6.16□□□□□ -1.42
LSP1YPL004C OCA2P53949 197 aa6.16□□□□□ -1.42
LSP1YPL004C YMR007WQ03675 126 aa6.16□□□□□ -1.42
LSP1YPL004C AVO2Q04749 426 aa6.16□□□□□ -1.42
LSP1YPL004C AYT1Q12226 474 aa6.16□□□□□ -1.42
LSP1YPL004C DFR1P07807 211 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
LSP1YPL004C SDH4P37298 181 aa6.15□□□□□ -1.42
LSP1YPL004C VMA22P38784 181 aa6.15□□□□□ -1.42
LSP1YPL004C PET100P38958 111 aa6.15□□□□□ -1.42
LSP1YPL004C SPC25P40014 221 aa6.15□□□□□ -1.42
LSP1YPL004C EMC5P40540 141 aa6.15□□□□□ -1.42
LSP1YPL004C ATG27P46989 271 aa6.15□□□□□ -1.42
LSP1YPL004C PHO23P50947 330 aa6.15□□□□□ -1.42
LSP1YPL004C CAF40P53829 373 aa6.15□□□□□ -1.42
LSP1YPL004C YCL001W-AP87012 153 aa6.15□□□□□ -1.42
LSP1YPL004C YLR122CQ12312 125 aa6.15□□□□□ -1.42
LSP1YPL004C YBR298C-AQ8TGK4 73 aa6.15□□□□□ -1.42
LSP1YPL004C TAR1Q8TGM6 124 aa6.15□□□□□ -1.42
LSP1YPL004C SOH1P38633 127 aa6.14□□□□□ -1.43
LSP1YPL004C FLO5P38894 1075 aa6.14□□□□□ -1.43
LSP1YPL004C SNX4P47057 423 aa6.14□□□□□ -1.43
LSP1YPL004C ATC1Q04005 294 aa6.14□□□□□ -1.43
LSP1YPL004C DDI2P0CH63 225 aa6.13□□□□□ -1.43
LSP1YPL004C DDI3P0CH64 225 aa6.13□□□□□ -1.43
LSP1YPL004C LSM2P38203 95 aaKnown RBP6.13□□□□□ -1.43
LSP1YPL004C TDA4P47153 279 aa6.13□□□□□ -1.43
LSP1YPL004C YNR071CP53757 342 aa6.13□□□□□ -1.43
LSP1YPL004C YDR274CP87283 123 aa6.13□□□□□ -1.43
LSP1YPL004C ADD37Q03233 198 aa6.13□□□□□ -1.43
LSP1YPL004C GRH1Q04410 372 aaKnown RBP6.13□□□□□ -1.43
LSP1YPL004C YLR281CQ05863 155 aa6.13□□□□□ -1.43
LSP1YPL004C RRG8Q06109 277 aa6.13□□□□□ -1.43
LSP1YPL004C YOR015WQ12169 119 aa6.13□□□□□ -1.43
LSP1YPL004C SMD3P43321 101 aaKnown RBP6.12□□□□□ -1.43
LSP1YPL004C GPI2P46961 280 aa6.12□□□□□ -1.43
LSP1YPL004C AIM24P47127 394 aa6.12□□□□□ -1.43
LSP1YPL004C UBC7Q02159 165 aa6.12□□□□□ -1.43
LSP1YPL004C COX19Q3E731 98 aa6.12□□□□□ -1.43
LSP1YPL004C YBR085C-AO43137 85 aa6.11□□□□□ -1.43
LSP1YPL004C RPP1AP05318 106 aaPredicted RBP6.11□□□□□ -1.43
LSP1YPL004C SHG1P38337 142 aa6.11□□□□□ -1.43
LSP1YPL004C MST28P39552 234 aa6.11□□□□□ -1.43
LSP1YPL004C MST27P53176 234 aa6.11□□□□□ -1.43
LSP1YPL004C ALG13P53178 202 aa6.11□□□□□ -1.43
LSP1YPL004C FYV6P53913 173 aa6.11□□□□□ -1.43
LSP1YPL004C TMA23Q03525 211 aa6.11□□□□□ -1.43
LSP1YPL004C COA4Q05809 96 aa6.11□□□□□ -1.43
LSP1YPL004C PRE9P23638 258 aaKnown RBP6.1□□□□□ -1.43
LSP1YPL004C TIR2P33890 251 aa6.1□□□□□ -1.43
LSP1YPL004C CMC1P36064 111 aa6.1□□□□□ -1.43
LSP1YPL004C SIM1P40472 476 aa6.1□□□□□ -1.43
LSP1YPL004C LCB3P47013 409 aa6.1□□□□□ -1.43
LSP1YPL004C DSK2P48510 373 aa6.1□□□□□ -1.43
LSP1YPL004C GNP1P48813 663 aa6.1□□□□□ -1.43
LSP1YPL004C UBC12P52491 188 aa6.1□□□□□ -1.43
LSP1YPL004C TRI1Q05024 226 aa6.1□□□□□ -1.43
LSP1YPL004C IZH3Q07959 543 aa6.1□□□□□ -1.43
LSP1YPL004C YOL160WQ08321 113 aa6.1□□□□□ -1.43
LSP1YPL004C FMP16Q12497 93 aa6.1□□□□□ -1.43
LSP1YPL004C ZRC1P20107 442 aa6.09□□□□□ -1.43
LSP1YPL004C HSP12P22943 109 aaKnown RBP6.09□□□□□ -1.43
LSP1YPL004C YIL077CP40508 320 aa6.09□□□□□ -1.43
LSP1YPL004C MRX11Q03079 207 aa6.09□□□□□ -1.43
LSP1YPL004C IZH1Q03419 316 aa6.09□□□□□ -1.43
LSP1YPL004C YNL146C-AQ3E7Z1 64 aa6.09□□□□□ -1.43
LSP1YPL004C RPL14AP36105 138 aaKnown RBP6.08□□□□□ -1.44
LSP1YPL004C RPL14BP38754 138 aaKnown RBP6.08□□□□□ -1.44
LSP1YPL004C GET2P40056 285 aa6.08□□□□□ -1.44
LSP1YPL004C MIC26P50087 233 aa6.08□□□□□ -1.44
LSP1YPL004C FMP41P53889 259 aaKnown RBP6.08□□□□□ -1.44
LSP1YPL004C ISU1Q03020 165 aa6.08□□□□□ -1.44
LSP1YPL004C FIT2Q08906 153 aa6.08□□□□□ -1.44
LSP1YPL004C RPS2P25443 254 aaKnown RBP6.07□□□□□ -1.44
LSP1YPL004C MSK1P32048 576 aa6.07□□□□□ -1.44
LSP1YPL004C PHD1P36093 366 aa6.07□□□□□ -1.44
LSP1YPL004C TRS20P38334 175 aa6.07□□□□□ -1.44
LSP1YPL004C LOC1P43586 204 aaPredicted RBP6.07□□□□□ -1.44
LSP1YPL004C YGR025WP53216 100 aa6.07□□□□□ -1.44
LSP1YPL004C PAU4P53427 120 aa6.07□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms