RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeastyeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT4YNL101W SHR5P41912 237 aa5.44□□□□□ -1.54
AVT4YNL101W ARP3P47117 449 aaKnown RBP5.44□□□□□ -1.54
AVT4YNL101W POP3P53833 195 aaPredicted RBP5.44□□□□□ -1.54
AVT4YNL101W DGA1Q08650 418 aa5.44□□□□□ -1.54
AVT4YNL101W CDC39P25655 2108 aaKnown RBP5.43□□□□□ -1.54
AVT4YNL101W YDR157WA0A023PZE8 133 aa5.43□□□□□ -1.54
AVT4YNL101W OPI3P05375 206 aa5.43□□□□□ -1.54
AVT4YNL101W SOL3P38858 249 aa5.43□□□□□ -1.54
AVT4YNL101W YGR269WP40326 108 aa5.43□□□□□ -1.54
AVT4YNL101W CTK2P46962 323 aa5.43□□□□□ -1.54
AVT4YNL101W YJL118WP47022 219 aa5.43□□□□□ -1.54
AVT4YNL101W MIC27P50945 234 aa5.43□□□□□ -1.54
AVT4YNL101W YIP3P53633 176 aa5.43□□□□□ -1.54
AVT4YNL101W PET191Q02772 108 aa5.43□□□□□ -1.54
AVT4YNL101W BET5Q03630 159 aa5.43□□□□□ -1.54
AVT4YNL101W LIP2Q06005 328 aa5.43□□□□□ -1.54
AVT4YNL101W PIN2Q12057 282 aa5.43□□□□□ -1.54
AVT4YNL101W PRP46Q12417 451 aaPredicted RBP5.43□□□□□ -1.54
AVT4YNL101W YLR415CO13578 112 aa5.42□□□□□ -1.54
AVT4YNL101W POX1P13711 748 aa5.42□□□□□ -1.54
AVT4YNL101W REC114P32841 428 aa5.42□□□□□ -1.54
AVT4YNL101W DUT1P33317 147 aa5.42□□□□□ -1.54
AVT4YNL101W YBL059WP34224 193 aa5.42□□□□□ -1.54
AVT4YNL101W DER1P38307 211 aa5.42□□□□□ -1.54
AVT4YNL101W YER076CP40049 302 aa5.42□□□□□ -1.54
AVT4YNL101W YGR039WP53225 103 aa5.42□□□□□ -1.54
AVT4YNL101W AYT1Q12226 474 aa5.42□□□□□ -1.54
AVT4YNL101W PHO85P17157 305 aa5.42□□□□□ -1.54
AVT4YNL101W ERV1P27882 189 aa5.42□□□□□ -1.54
AVT4YNL101W MRPL24P36525 258 aaPredicted RBP5.42□□□□□ -1.54
AVT4YNL101W ATF1P40353 525 aa5.42□□□□□ -1.54
AVT4YNL101W SBH2P52871 88 aa5.42□□□□□ -1.54
AVT4YNL101W CPD1P53314 239 aa5.42□□□□□ -1.54
AVT4YNL101W NCE103P53615 221 aa5.42□□□□□ -1.54
AVT4YNL101W MRPL1Q04599 285 aa5.42□□□□□ -1.54
AVT4YNL101W MRPL20P22354 195 aaPredicted RBP5.41□□□□□ -1.54
AVT4YNL101W PAD1P33751 242 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
AVT4YNL101W YHL026CP38740 315 aa5.41□□□□□ -1.54
AVT4YNL101W YER085CP40058 173 aa5.41□□□□□ -1.54
AVT4YNL101W YGL118CP53132 145 aa5.41□□□□□ -1.54
AVT4YNL101W BRP1P53194 125 aa5.41□□□□□ -1.54
AVT4YNL101W YPL264CQ08980 353 aa5.41□□□□□ -1.54
AVT4YNL101W RPL1AP0CX43 217 aaKnown RBP5.41□□□□□ -1.54
AVT4YNL101W RPL1BP0CX44 217 aaKnown RBP5.41□□□□□ -1.54
AVT4YNL101W CPT1P17898 393 aa5.41□□□□□ -1.54
AVT4YNL101W QCR9P22289 66 aa5.41□□□□□ -1.54
AVT4YNL101W SRP21P32342 167 aa5.41□□□□□ -1.54
AVT4YNL101W SDS23P53172 527 aa5.41□□□□□ -1.54
AVT4YNL101W YNR021WP53723 404 aaKnown RBP5.41□□□□□ -1.54
AVT4YNL101W PAM18Q07914 168 aa5.41□□□□□ -1.54
AVT4YNL101W MCH4Q08268 501 aa5.41□□□□□ -1.54
AVT4YNL101W YDR215CQ12240 137 aa5.41□□□□□ -1.54
AVT4YNL101W YBR255C-AQ3E776 120 aa5.41□□□□□ -1.54
AVT4YNL101W YER039C-AP0CD97 72 aa5.4□□□□□ -1.54
AVT4YNL101W RPL12AP0CX53 165 aaKnown RBP5.4□□□□□ -1.54
AVT4YNL101W RPL12BP0CX54 165 aa5.4□□□□□ -1.54
AVT4YNL101W ARF2P19146 181 aaKnown RBP5.4□□□□□ -1.54
AVT4YNL101W VMA3P25515 160 aa5.4□□□□□ -1.54
AVT4YNL101W EGT2P42835 1041 aa5.4□□□□□ -1.54
AVT4YNL101W CWP2P43497 92 aa5.4□□□□□ -1.54
AVT4YNL101W YNR048WP53740 393 aa5.4□□□□□ -1.54
AVT4YNL101W YDL218WQ07629 317 aa5.4□□□□□ -1.54
AVT4YNL101W HUG1Q6Q5K6 68 aa5.4□□□□□ -1.54
AVT4YNL101W RPB8P20436 146 aa5.39□□□□□ -1.55
AVT4YNL101W RFA3P26755 122 aaKnown RBP5.39□□□□□ -1.55
AVT4YNL101W CMC1P36064 111 aa5.39□□□□□ -1.55
AVT4YNL101W YMR178WQ03219 274 aaKnown RBP5.39□□□□□ -1.55
AVT4YNL101W YLR296WQ05898 108 aa5.39□□□□□ -1.55
AVT4YNL101W MRPL51Q06090 140 aaPredicted RBP5.39□□□□□ -1.55
AVT4YNL101W FCY1Q12178 158 aa5.39□□□□□ -1.55
AVT4YNL101W YSR3P23501 404 aa5.39□□□□□ -1.55
AVT4YNL101W NHP2P32495 156 aaPredicted RBP5.39□□□□□ -1.55
AVT4YNL101W YPT10P38146 199 aa5.39□□□□□ -1.55
AVT4YNL101W YPQ1Q12010 308 aa5.39□□□□□ -1.55
AVT4YNL101W USB1Q12208 290 aaKnown RBP5.39□□□□□ -1.55
AVT4YNL101W DFM1Q12743 341 aaKnown RBP5.39□□□□□ -1.55
AVT4YNL101W CYC3P06182 269 aa5.38□□□□□ -1.55
AVT4YNL101W FRM2P37261 193 aa5.38□□□□□ -1.55
AVT4YNL101W YNL208WP40159 199 aaKnown RBP5.38□□□□□ -1.55
AVT4YNL101W DSK2P48510 373 aa5.38□□□□□ -1.55
AVT4YNL101W YNR064CP53750 290 aa5.38□□□□□ -1.55
AVT4YNL101W YLR302CO13544 120 aa5.38□□□□□ -1.55
AVT4YNL101W QRI5P32344 111 aa5.38□□□□□ -1.55
AVT4YNL101W CYB5P40312 120 aa5.38□□□□□ -1.55
AVT4YNL101W YIL089WP40500 205 aa5.38□□□□□ -1.55
AVT4YNL101W YIP1P53039 248 aa5.38□□□□□ -1.55
AVT4YNL101W YMR316C-AI2HB70 103 aa5.37□□□□□ -1.55
AVT4YNL101W RPL20AP0CX23 172 aaKnown RBP5.37□□□□□ -1.55
AVT4YNL101W RPL20BP0CX24 172 aaPredicted RBP5.37□□□□□ -1.55
AVT4YNL101W ERG28P40030 148 aa5.37□□□□□ -1.55
AVT4YNL101W SUN4P53616 420 aa5.37□□□□□ -1.55
AVT4YNL101W ROT1Q03691 256 aa5.37□□□□□ -1.55
AVT4YNL101W RPL23AP0CX41 137 aaKnown RBP5.36□□□□□ -1.55
AVT4YNL101W RPL23BP0CX42 137 aaKnown RBP5.36□□□□□ -1.55
AVT4YNL101W HUA1P40325 198 aa5.36□□□□□ -1.55
AVT4YNL101W CUP9P41817 306 aa5.36□□□□□ -1.55
AVT4YNL101W ATG21Q02887 496 aa5.36□□□□□ -1.55
AVT4YNL101W MIX17Q03667 156 aa5.36□□□□□ -1.55
AVT4YNL101W MSA1Q08471 629 aa5.36□□□□□ -1.55
AVT4YNL101W MSI1P13712 422 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms