RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C YRA2P36036 203 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
CTF18YMR078C GLR1P41921 483 aaKnown RBP2.19□□□□□ -2.06
CTF18YMR078C ORM1P53224 222 aa2.19□□□□□ -2.06
CTF18YMR078C QCR2P07257 368 aa2.18□□□□□ -2.06
CTF18YMR078C YBL010CP32788 280 aa2.18□□□□□ -2.06
CTF18YMR078C DUR1,2P32528 1835 aaKnown RBP2.18□□□□□ -2.06
CTF18YMR078C SOK1P40317 901 aa2.18□□□□□ -2.06
CTF18YMR078C PAC10P48363 199 aa2.17□□□□□ -2.06
CTF18YMR078C TMA20P89886 181 aaPredicted RBP2.17□□□□□ -2.06
CTF18YMR078C SLM6P38343 150 aa2.17□□□□□ -2.06
CTF18YMR078C MET31Q03081 177 aa2.17□□□□□ -2.06
CTF18YMR078C TRM3Q07527 1436 aa2.16□□□□□ -2.06
CTF18YMR078C YDR391CQ04170 232 aa2.16□□□□□ -2.06
CTF18YMR078C YPR202WQ08993 238 aa2.15□□□□□ -2.06
CTF18YMR078C YMR030W-AQ3E760 96 aa2.15□□□□□ -2.06
CTF18YMR078C NQM1P53228 333 aaPredicted RBP2.15□□□□□ -2.07
CTF18YMR078C GRX5Q02784 150 aa2.14□□□□□ -2.07
CTF18YMR078C LSM3P57743 89 aaKnown RBP2.13□□□□□ -2.07
CTF18YMR078C NSL1Q12143 216 aa2.13□□□□□ -2.07
CTF18YMR078C PTC1P35182 281 aa2.13□□□□□ -2.07
CTF18YMR078C YBR242WP38331 238 aa2.13□□□□□ -2.07
CTF18YMR078C ATP5P09457 212 aa2.12□□□□□ -2.07
CTF18YMR078C LIP1Q03579 150 aa2.12□□□□□ -2.07
CTF18YMR078C YDR102CQ03864 110 aa2.12□□□□□ -2.07
CTF18YMR078C AVO2Q04749 426 aa2.11□□□□□ -2.07
CTF18YMR078C QCR6P00127 147 aa2.11□□□□□ -2.07
CTF18YMR078C DER1P38307 211 aa2.11□□□□□ -2.07
CTF18YMR078C YDL241WQ07738 123 aa2.11□□□□□ -2.07
CTF18YMR078C ARC19P33204 171 aaKnown RBP2.1□□□□□ -2.07
CTF18YMR078C UBC6P33296 250 aaPredicted RBP2.1□□□□□ -2.07
CTF18YMR078C YPR114WQ06107 315 aa2.1□□□□□ -2.07
CTF18YMR078C RPL30P14120 105 aaKnown RBP2.1□□□□□ -2.07
CTF18YMR078C CCC1P47818 322 aa2.1□□□□□ -2.07
CTF18YMR078C MAK3Q03503 176 aa2.1□□□□□ -2.07
CTF18YMR078C YPR203WQ08994 102 aa2.1□□□□□ -2.07
CTF18YMR078C YLR046CQ12253 270 aa2.1□□□□□ -2.07
CTF18YMR078C INO4P13902 151 aa2.09□□□□□ -2.07
CTF18YMR078C MRPL15P36523 253 aa2.09□□□□□ -2.07
CTF18YMR078C MOB1P40484 314 aa2.09□□□□□ -2.07
CTF18YMR078C RPS28BP0C0X0 67 aaKnown RBP2.09□□□□□ -2.08
CTF18YMR078C UBC8P28263 218 aa2.09□□□□□ -2.08
CTF18YMR078C FIP1P45976 327 aa2.09□□□□□ -2.08
CTF18YMR078C ATG10Q07879 167 aa2.09□□□□□ -2.08
CTF18YMR078C EFG1Q3E705 233 aaKnown RBP2.09□□□□□ -2.08
CTF18YMR078C RPS28AQ3E7X9 67 aaPredicted RBP2.09□□□□□ -2.08
CTF18YMR078C YGR269WP40326 108 aa2.08□□□□□ -2.08
CTF18YMR078C DLS1P40366 167 aa2.08□□□□□ -2.08
CTF18YMR078C SBH2P52871 88 aa2.08□□□□□ -2.08
CTF18YMR078C YML079WQ03629 201 aa2.08□□□□□ -2.08
CTF18YMR078C SLH1P53327 1967 aaKnown RBP2.08□□□□□ -2.08
CTF18YMR078C YPT31P38555 223 aaKnown RBP2.07□□□□□ -2.08
CTF18YMR078C APQ12P40532 138 aa2.07□□□□□ -2.08
CTF18YMR078C SPS2P08459 502 aa2.06□□□□□ -2.08
CTF18YMR078C YNR064CP53750 290 aa2.06□□□□□ -2.08
CTF18YMR078C HTD2P38790 280 aaKnown RBP2.06□□□□□ -2.08
CTF18YMR078C HRD1Q08109 551 aa2.06□□□□□ -2.08
CTF18YMR078C YDR476CQ03362 224 aa2.05□□□□□ -2.08
CTF18YMR078C MRS4P23500 304 aa2.05□□□□□ -2.08
CTF18YMR078C FIG1P38224 298 aa2.05□□□□□ -2.08
CTF18YMR078C YHL037CP38733 133 aa2.05□□□□□ -2.08
CTF18YMR078C YDL157CQ12082 118 aa2.05□□□□□ -2.08
CTF18YMR078C HHT1P61830 136 aa2.04□□□□□ -2.08
CTF18YMR078C PEX34P25584 144 aa2.03□□□□□ -2.08
CTF18YMR078C AHT1P29589 182 aa2.03□□□□□ -2.08
CTF18YMR078C HUA1P40325 198 aa2.03□□□□□ -2.08
CTF18YMR078C UIP4Q08926 304 aa2.03□□□□□ -2.08
CTF18YMR078C SRP102P36057 244 aaPredicted RBP2.02□□□□□ -2.09
CTF18YMR078C FIT1Q04433 528 aa2.02□□□□□ -2.09
CTF18YMR078C BUB2P26448 306 aaPredicted RBP2.02□□□□□ -2.09
CTF18YMR078C PET20Q99373 253 aa2.02□□□□□ -2.09
CTF18YMR078C SHB17P36136 271 aaKnown RBP2.01□□□□□ -2.09
CTF18YMR078C CMC4Q3E7A9 73 aa2.01□□□□□ -2.09
CTF18YMR078C YGL193CP53097 103 aa2.01□□□□□ -2.09
CTF18YMR078C RPS25BP0C0T4 108 aaKnown RBP2□□□□□ -2.09
CTF18YMR078C YER181CP40097 107 aa2□□□□□ -2.09
CTF18YMR078C YFL051CP43552 160 aa2□□□□□ -2.09
CTF18YMR078C RPS25AQ3E792 108 aaPredicted RBP2□□□□□ -2.09
CTF18YMR078C YJL218WP40892 196 aaKnown RBP1.99□□□□□ -2.09
CTF18YMR078C RPL37AP49166 88 aaKnown RBP1.99□□□□□ -2.09
CTF18YMR078C YGL230CP53074 147 aa1.99□□□□□ -2.09
CTF18YMR078C YMR007WQ03675 126 aa1.99□□□□□ -2.09
CTF18YMR078C PBI2P0CT04 75 aaKnown RBP1.97□□□□□ -2.09
CTF18YMR078C GLC8P41818 229 aa1.97□□□□□ -2.09
CTF18YMR078C LCL2Q08045 131 aa1.97□□□□□ -2.09
CTF18YMR078C SPT14P32363 452 aa1.97□□□□□ -2.09
CTF18YMR078C PHO13P19881 312 aa1.96□□□□□ -2.1
CTF18YMR078C CIN5P40917 295 aa1.96□□□□□ -2.1
CTF18YMR078C YKR070WP36151 352 aaKnown RBP1.95□□□□□ -2.1
CTF18YMR078C SPA2P23201 1466 aaKnown RBP1.95□□□□□ -2.1
CTF18YMR078C MRPL24P36525 258 aaPredicted RBP1.95□□□□□ -2.1
CTF18YMR078C ADE6P38972 1358 aaKnown RBP1.94□□□□□ -2.1
CTF18YMR078C RIF1P29539 1916 aa1.94□□□□□ -2.1
CTF18YMR078C TAF2P23255 1407 aa1.94□□□□□ -2.1
CTF18YMR078C SRP21P32342 167 aa1.94□□□□□ -2.1
CTF18YMR078C EFM5P53200 248 aaKnown RBP1.94□□□□□ -2.1
CTF18YMR078C YPD1Q07688 167 aa1.93□□□□□ -2.1
CTF18YMR078C RFU1Q08003 200 aa1.93□□□□□ -2.1
CTF18YMR078C DDR48P18899 430 aaKnown RBP1.93□□□□□ -2.1
CTF18YMR078C YEL014CP39999 101 aa1.93□□□□□ -2.1
CTF18YMR078C GEP7P53171 287 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms