RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C PCL2P25693 308 aa2.23□□□□□ -2.05
YMR050CYMR050C MIG3P39943 394 aa2.23□□□□□ -2.05
YMR050CYMR050C PIR5P46999 287 aa2.23□□□□□ -2.05
YMR050CYMR050C BXI1P48558 297 aa2.23□□□□□ -2.05
YMR050CYMR050C PNC1P53184 216 aaKnown RBP2.23□□□□□ -2.05
YMR050CYMR050C CYC7P00045 113 aa2.23□□□□□ -2.05
YMR050CYMR050C SRB6P32570 121 aa2.23□□□□□ -2.05
YMR050CYMR050C GPX2P38143 162 aa2.23□□□□□ -2.05
YMR050CYMR050C CCS1P40202 249 aaKnown RBP2.23□□□□□ -2.05
YMR050CYMR050C CWP2P43497 92 aa2.23□□□□□ -2.05
YMR050CYMR050C COX12Q01519 83 aa2.23□□□□□ -2.05
YMR050CYMR050C ECM12O13529 151 aa2.22□□□□□ -2.05
YMR050CYMR050C RPL39P04650 51 aa2.22□□□□□ -2.05
YMR050CYMR050C RAD6P06104 172 aa2.22□□□□□ -2.05
YMR050CYMR050C ATP5P09457 212 aa2.22□□□□□ -2.05
YMR050CYMR050C UBI4P0CG63 381 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C YBL059WP34224 193 aa2.22□□□□□ -2.05
YMR050CYMR050C AST1P35183 429 aa2.22□□□□□ -2.05
YMR050CYMR050C RPL14AP36105 138 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C RPL14BP38754 138 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C MPM1P40364 252 aa2.22□□□□□ -2.05
YMR050CYMR050C VHS2P40463 436 aa2.22□□□□□ -2.05
YMR050CYMR050C YIL012WP40551 113 aa2.22□□□□□ -2.05
YMR050CYMR050C RPA43P46669 326 aa2.22□□□□□ -2.05
YMR050CYMR050C YJR096WP47137 282 aa2.22□□□□□ -2.05
YMR050CYMR050C NRG1Q03125 231 aa2.22□□□□□ -2.05
YMR050CYMR050C YMR253CQ04835 414 aa2.22□□□□□ -2.05
YMR050CYMR050C PEX27Q08580 376 aa2.22□□□□□ -2.05
YMR050CYMR050C TAO3P40468 2376 aa2.22□□□□□ -2.05
YMR050CYMR050C PIS1P06197 220 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C ERV1P27882 189 aa2.22□□□□□ -2.05
YMR050CYMR050C PET100P38958 111 aa2.22□□□□□ -2.05
YMR050CYMR050C BNA6P43619 295 aa2.22□□□□□ -2.05
YMR050CYMR050C YJR015WP47090 510 aa2.22□□□□□ -2.05
YMR050CYMR050C YGL149WP53116 101 aa2.22□□□□□ -2.05
YMR050CYMR050C UTP15Q04305 513 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C MED7Q08278 222 aa2.22□□□□□ -2.05
YMR050CYMR050C YGK3Q12222 375 aaPredicted RBP2.22□□□□□ -2.05
YMR050CYMR050C FUN14P18411 198 aa2.22□□□□□ -2.05
YMR050CYMR050C IMP1P28627 190 aa2.22□□□□□ -2.05
YMR050CYMR050C RRT13P40042 185 aa2.22□□□□□ -2.05
YMR050CYMR050C YDR274CP87283 123 aa2.22□□□□□ -2.05
YMR050CYMR050C FKS3Q04952 1785 aa2.22□□□□□ -2.05
YMR050CYMR050C ANT1Q06497 328 aa2.22□□□□□ -2.05
YMR050CYMR050C NCE102Q12207 173 aaRIP-Chip data2.22□□□□□ -2.05not detected
YMR050CYMR050C YBL112CQ3E7Y4 105 aa2.22□□□□□ -2.05
YMR050CYMR050C VPS63O13549 108 aa2.22□□□□□ -2.05
YMR050CYMR050C RPS25BP0C0T4 108 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C RPS11AP0CX47 156 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C RPS11BP0CX48 156 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C SAG1P20840 650 aa2.22□□□□□ -2.05
YMR050CYMR050C SCM4P32564 187 aa2.22□□□□□ -2.05
YMR050CYMR050C POP8P38208 133 aa2.22□□□□□ -2.05
YMR050CYMR050C DER1P38307 211 aa2.22□□□□□ -2.05
YMR050CYMR050C UBC12P52491 188 aa2.22□□□□□ -2.05
YMR050CYMR050C BOR1P53838 576 aa2.22□□□□□ -2.05
YMR050CYMR050C SNO1Q03144 224 aa2.22□□□□□ -2.05
YMR050CYMR050C IZH1Q03419 316 aa2.22□□□□□ -2.05
YMR050CYMR050C TMA23Q03525 211 aa2.22□□□□□ -2.05
YMR050CYMR050C NMA1Q06178 401 aaKnown RBP2.22□□□□□ -2.05
YMR050CYMR050C RPS25AQ3E792 108 aaPredicted RBP2.22□□□□□ -2.05
YMR050CYMR050C HTB2P02294 131 aa2.21□□□□□ -2.06
YMR050CYMR050C MRPL9P31334 269 aa2.21□□□□□ -2.06
YMR050CYMR050C MRPL16P38064 232 aa2.21□□□□□ -2.06
YMR050CYMR050C MRPS9P38120 278 aa2.21□□□□□ -2.06
YMR050CYMR050C ERG28P40030 148 aa2.21□□□□□ -2.06
YMR050CYMR050C HAC1P41546 238 aa2.21□□□□□ -2.06
YMR050CYMR050C MAK3Q03503 176 aa2.21□□□□□ -2.06
YMR050CYMR050C YOR343CQ12484 108 aa2.21□□□□□ -2.06
YMR050CYMR050C MRP2P10663 115 aaPredicted RBP2.21□□□□□ -2.06
YMR050CYMR050C YCR006CP25350 157 aa2.21□□□□□ -2.06
YMR050CYMR050C AME1P38313 324 aa2.21□□□□□ -2.06
YMR050CYMR050C GTT1P40582 234 aa2.21□□□□□ -2.06
YMR050CYMR050C TPC1P53257 314 aa2.21□□□□□ -2.06
YMR050CYMR050C YGR219WP53307 113 aa2.21□□□□□ -2.06
YMR050CYMR050C DPP1Q05521 289 aa2.21□□□□□ -2.06
YMR050CYMR050C CTR3Q06686 241 aa2.21□□□□□ -2.06
YMR050CYMR050C TY1A-NL1Q12391 440 aaKnown RBP2.21□□□□□ -2.06
YMR050CYMR050C TY1B-BRQ12193 1756 aa2.21□□□□□ -2.06
YMR050CYMR050C TY1B-GR3Q12316 1755 aa2.21□□□□□ -2.06
YMR050CYMR050C TY1B-ORQ92393 1755 aa2.21□□□□□ -2.06
YMR050CYMR050C DBP2P24783 546 aaKnown RBP2.21□□□□□ -2.06
YMR050CYMR050C YPT10P38146 199 aa2.21□□□□□ -2.06
YMR050CYMR050C SDH8P38345 138 aa2.21□□□□□ -2.06
YMR050CYMR050C YHR140WP38842 239 aa2.21□□□□□ -2.06
YMR050CYMR050C ASP1P38986 381 aaPredicted RBP2.21□□□□□ -2.06
YMR050CYMR050C MST28P39552 234 aa2.21□□□□□ -2.06
YMR050CYMR050C TY1A-MR1Q04215 440 aa2.21□□□□□ -2.06
YMR050CYMR050C TY1A-BLQ12266 440 aa2.21□□□□□ -2.06
YMR050CYMR050C SET6Q12529 373 aa2.21□□□□□ -2.06
YMR050CYMR050C CMC4Q3E7A9 73 aa2.21□□□□□ -2.06
YMR050CYMR050C YLR236CA0A023PZG4 107 aa2.21□□□□□ -2.06
YMR050CYMR050C ADH2P00331 348 aaKnown RBP2.21□□□□□ -2.06
YMR050CYMR050C MRS3P10566 314 aa2.21□□□□□ -2.06
YMR050CYMR050C RMD6P39975 231 aa2.21□□□□□ -2.06
YMR050CYMR050C YER076CP40049 302 aa2.21□□□□□ -2.06
YMR050CYMR050C PRY1P47032 299 aa2.21□□□□□ -2.06
YMR050CYMR050C MIC26P50087 233 aa2.21□□□□□ -2.06
YMR050CYMR050C YDR366CP87287 132 aa2.21□□□□□ -2.06
YMR050CYMR050C RDL1Q12305 139 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms