RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C RNH202Q05635 350 aa2.04□□□□□ -2.08
YMR046CYMR046C YPR127WQ06494 345 aa2.04□□□□□ -2.08
YMR046CYMR046C MCP1Q12106 302 aa2.04□□□□□ -2.08
YMR046CYMR046C SEC4P07560 215 aaKnown RBP2.03□□□□□ -2.08
YMR046CYMR046C PUT1P09368 476 aa2.03□□□□□ -2.08
YMR046CYMR046C YPR170W-BP0C5R9 85 aa2.03□□□□□ -2.08
YMR046CYMR046C YOL162WP0CF19 215 aa2.03□□□□□ -2.08
YMR046CYMR046C HSP30P25619 332 aa2.03□□□□□ -2.08
YMR046CYMR046C TIM12P32830 109 aa2.03□□□□□ -2.08
YMR046CYMR046C FMP23P38231 175 aa2.03□□□□□ -2.08
YMR046CYMR046C EGD2P38879 174 aaKnown RBP2.03□□□□□ -2.08
YMR046CYMR046C IPT1P38954 527 aa2.03□□□□□ -2.08
YMR046CYMR046C GIM3P53900 129 aa2.03□□□□□ -2.08
YMR046CYMR046C MIX14Q04341 121 aa2.03□□□□□ -2.08
YMR046CYMR046C LPP1Q04396 274 aa2.03□□□□□ -2.08
YMR046CYMR046C ARR2Q06597 130 aa2.03□□□□□ -2.08
YMR046CYMR046C PST2Q12335 198 aaKnown RBP2.03□□□□□ -2.08
YMR046CYMR046C RPL35AP0CX84 120 aaKnown RBP2.02□□□□□ -2.09
YMR046CYMR046C RPL35BP0CX85 120 aaKnown RBP2.02□□□□□ -2.09
YMR046CYMR046C ATG22P25568 528 aa2.02□□□□□ -2.09
YMR046CYMR046C STP22P25604 385 aa2.02□□□□□ -2.09
YMR046CYMR046C AHC2P25649 128 aa2.02□□□□□ -2.09
YMR046CYMR046C SRP102P36057 244 aaPredicted RBP2.02□□□□□ -2.09
YMR046CYMR046C YBR285WP38354 144 aa2.02□□□□□ -2.09
YMR046CYMR046C NVJ1P38881 321 aa2.02□□□□□ -2.09
YMR046CYMR046C BMT5P40493 336 aa2.02□□□□□ -2.09
YMR046CYMR046C YGL235WP53071 178 aa2.02□□□□□ -2.09
YMR046CYMR046C YNR062CP53748 327 aa2.02□□□□□ -2.09
YMR046CYMR046C NUP49Q02199 472 aa2.02□□□□□ -2.09
YMR046CYMR046C PRM15Q03262 622 aa2.02□□□□□ -2.09
YMR046CYMR046C SPC3Q12133 184 aa2.02□□□□□ -2.09
YMR046CYMR046C MDM32Q12171 622 aa2.02□□□□□ -2.09
YMR046CYMR046C REP2P03872 296 aa2.01□□□□□ -2.09
YMR046CYMR046C YPK2P18961 677 aa2.01□□□□□ -2.09
YMR046CYMR046C MDH3P32419 343 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
YMR046CYMR046C SPS18P32572 300 aa2.01□□□□□ -2.09
YMR046CYMR046C UTP11P34247 250 aaPredicted RBP2.01□□□□□ -2.09
YMR046CYMR046C SHE2P36068 246 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
YMR046CYMR046C DAD3P69850 94 aa2.01□□□□□ -2.09
YMR046CYMR046C ELP6Q04868 273 aa2.01□□□□□ -2.09
YMR046CYMR046C YOR289WQ12012 251 aaPredicted RBP2.01□□□□□ -2.09
YMR046CYMR046C YOR283WQ12040 230 aaKnown RBP2.01□□□□□ -2.09
YMR046CYMR046C Q0144Q9ZZW2 109 aa2.01□□□□□ -2.09
YMR046CYMR046C SLH1P53327 1967 aaKnown RBP2.01□□□□□ -2.09
YMR046CYMR046C BRR2P32639 2163 aaKnown RBP2□□□□□ -2.09
YMR046CYMR046C POL2P21951 2222 aaKnown RBP2□□□□□ -2.09
YMR046CYMR046C QCR7P00128 127 aa2□□□□□ -2.09
YMR046CYMR046C RPL27AP0C2H6 136 aaKnown RBP2□□□□□ -2.09
YMR046CYMR046C RPL27BP0C2H7 136 aaKnown RBP2□□□□□ -2.09
YMR046CYMR046C HSP150P32478 413 aa2□□□□□ -2.09
YMR046CYMR046C CCC1P47818 322 aa2□□□□□ -2.09
YMR046CYMR046C PAU12P53343 120 aa2□□□□□ -2.09
YMR046CYMR046C MPA43P53583 542 aaPredicted RBP2□□□□□ -2.09
YMR046CYMR046C PGA1P53896 198 aa2□□□□□ -2.09
YMR046CYMR046C NRK1P53915 240 aa2□□□□□ -2.09
YMR046CYMR046C YMR099CQ03161 297 aaKnown RBP2□□□□□ -2.09
YMR046CYMR046C RRP17Q04031 235 aaPredicted RBP2□□□□□ -2.09
YMR046CYMR046C GPI17Q04080 534 aa2□□□□□ -2.09
YMR046CYMR046C GAL83Q04739 417 aa2□□□□□ -2.09
YMR046CYMR046C YDL180WQ12301 547 aa2□□□□□ -2.09
YMR046CYMR046C TDA8Q6B2U8 126 aa2□□□□□ -2.09
YMR046CYMR046C CDC7P06243 507 aa1.99□□□□□ -2.09
YMR046CYMR046C YLR156WP0CE96 114 aa1.99□□□□□ -2.09
YMR046CYMR046C YLR159WP0CE97 114 aa1.99□□□□□ -2.09
YMR046CYMR046C YLR161WP0CE98 114 aa1.99□□□□□ -2.09
YMR046CYMR046C MRPL28P36527 147 aa1.99□□□□□ -2.09
YMR046CYMR046C RMD6P39975 231 aa1.99□□□□□ -2.09
YMR046CYMR046C DLS1P40366 167 aa1.99□□□□□ -2.09
YMR046CYMR046C TIR3P40552 269 aa1.99□□□□□ -2.09
YMR046CYMR046C YAE1P47118 141 aaPredicted RBP1.99□□□□□ -2.09
YMR046CYMR046C YGR050CP53231 118 aa1.99□□□□□ -2.09
YMR046CYMR046C YGR219WP53307 113 aa1.99□□□□□ -2.09
YMR046CYMR046C LSM7P53905 115 aaKnown RBP1.99□□□□□ -2.09
YMR046CYMR046C PET191Q02772 108 aa1.99□□□□□ -2.09
YMR046CYMR046C MAK3Q03503 176 aa1.99□□□□□ -2.09
YMR046CYMR046C RAF1Q06891 181 aa1.99□□□□□ -2.09
YMR046CYMR046C USB1Q12208 290 aaKnown RBP1.99□□□□□ -2.09
YMR046CYMR046C ATO3Q12359 275 aa1.99□□□□□ -2.09
YMR046CYMR046C YOR343CQ12484 108 aa1.99□□□□□ -2.09
YMR046CYMR046C SUS1Q6WNK7 96 aa1.99□□□□□ -2.09
YMR046CYMR046C KIN28P06242 306 aa1.98□□□□□ -2.09
YMR046CYMR046C COX9P07255 59 aa1.98□□□□□ -2.09
YMR046CYMR046C MDH2P22133 377 aa1.98□□□□□ -2.09
YMR046CYMR046C PEX4P29340 183 aa1.98□□□□□ -2.09
YMR046CYMR046C CLG1P35190 452 aa1.98□□□□□ -2.09
YMR046CYMR046C SFK1P35735 353 aa1.98□□□□□ -2.09
YMR046CYMR046C PAU24P38155 120 aa1.98□□□□□ -2.09
YMR046CYMR046C PRS3P38689 320 aaKnown RBP1.98□□□□□ -2.09
YMR046CYMR046C FCY21P40039 528 aa1.98□□□□□ -2.09
YMR046CYMR046C PHB1P40961 287 aa1.98□□□□□ -2.09
YMR046CYMR046C YFR054CP43622 192 aa1.98□□□□□ -2.09
YMR046CYMR046C GRX5Q02784 150 aa1.98□□□□□ -2.09
YMR046CYMR046C RCE1Q03530 315 aa1.98□□□□□ -2.09
YMR046CYMR046C MRPS8Q03799 155 aa1.98□□□□□ -2.09
YMR046CYMR046C GRE1Q08969 168 aa1.98□□□□□ -2.09
YMR046CYMR046C YLR099W-AQ3E798 87 aa1.98□□□□□ -2.09
YMR046CYMR046C YHR214C-EQ8TGK0 99 aa1.98□□□□□ -2.09
YMR046CYMR046C FLO9P39712 1322 aa1.98□□□□□ -2.09
YMR046CYMR046C RPL25P04456 142 aaKnown RBP1.97□□□□□ -2.09
YMR046CYMR046C SIR2P06700 562 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms