RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W FCY2P17064 533 aa1.33□□□□□ -2.2
CSI1YMR025W MRPS28P21771 286 aa1.33□□□□□ -2.2
CSI1YMR025W PPA2P28239 310 aa1.33□□□□□ -2.2
CSI1YMR025W NTG1P31378 399 aa1.33□□□□□ -2.2
CSI1YMR025W TFC1P32367 649 aa1.33□□□□□ -2.2
CSI1YMR025W RTC3P38804 111 aaPredicted RBP1.33□□□□□ -2.2
CSI1YMR025W PEX17P40155 199 aa1.33□□□□□ -2.2
CSI1YMR025W MCM22P47167 239 aa1.33□□□□□ -2.2
CSI1YMR025W RMR1P53060 241 aa1.33□□□□□ -2.2
CSI1YMR025W NSA1P53136 463 aaPredicted RBP1.33□□□□□ -2.2
CSI1YMR025W ERV29P53337 310 aa1.33□□□□□ -2.2
CSI1YMR025W YDC1Q02896 317 aa1.33□□□□□ -2.2
CSI1YMR025W SPC24Q04477 213 aa1.33□□□□□ -2.2
CSI1YMR025W YMR315WQ04869 349 aaKnown RBP1.33□□□□□ -2.2
CSI1YMR025W SPC2Q04969 178 aa1.33□□□□□ -2.2
CSI1YMR025W ATG39Q06159 398 aa1.33□□□□□ -2.2
CSI1YMR025W YOR289WQ12012 251 aaPredicted RBP1.33□□□□□ -2.2
CSI1YMR025W USB1Q12208 290 aaKnown RBP1.33□□□□□ -2.2
CSI1YMR025W RIB3Q99258 208 aa1.33□□□□□ -2.2
CSI1YMR025W RPL39P04650 51 aa1.32□□□□□ -2.2
CSI1YMR025W RPL30P14120 105 aaKnown RBP1.32□□□□□ -2.2
CSI1YMR025W STE18P18852 110 aa1.32□□□□□ -2.2
CSI1YMR025W YMR31P19955 123 aa1.32□□□□□ -2.2
CSI1YMR025W SUA7P29055 345 aaPredicted RBP1.32□□□□□ -2.2
CSI1YMR025W VMA6P32366 345 aaKnown RBP1.32□□□□□ -2.2
CSI1YMR025W DOA4P32571 926 aa1.32□□□□□ -2.2
CSI1YMR025W TMA19P35691 167 aaKnown RBP1.32□□□□□ -2.2
CSI1YMR025W SRY1P36007 326 aa1.32□□□□□ -2.2
CSI1YMR025W SRP102P36057 244 aaPredicted RBP1.32□□□□□ -2.2
CSI1YMR025W YBR063CP38083 404 aa1.32□□□□□ -2.2
CSI1YMR025W RPF1P38805 295 aaKnown RBP1.32□□□□□ -2.2
CSI1YMR025W YAR068WP39564 161 aa1.32□□□□□ -2.2
CSI1YMR025W FLX1P40464 311 aa1.32□□□□□ -2.2
CSI1YMR025W OTU1P43558 301 aa1.32□□□□□ -2.2
CSI1YMR025W FAR7P43592 221 aa1.32□□□□□ -2.2
CSI1YMR025W ALG13P53178 202 aa1.32□□□□□ -2.2
CSI1YMR025W NQM1P53228 333 aaPredicted RBP1.32□□□□□ -2.2
CSI1YMR025W NRK1P53915 240 aa1.32□□□□□ -2.2
CSI1YMR025W HHT1P61830 136 aa1.32□□□□□ -2.2
CSI1YMR025W TIM11P81449 96 aaPredicted RBP1.32□□□□□ -2.2
CSI1YMR025W NUP49Q02199 472 aa1.32□□□□□ -2.2
CSI1YMR025W YDR248CQ03786 193 aa1.32□□□□□ -2.2
CSI1YMR025W PUT1P09368 476 aa1.31□□□□□ -2.2
CSI1YMR025W PHO85P17157 305 aa1.31□□□□□ -2.2
CSI1YMR025W RPL24BP24000 155 aaKnown RBP1.31□□□□□ -2.2
CSI1YMR025W PDX3P38075 228 aaKnown RBP1.31□□□□□ -2.2
CSI1YMR025W ECM31P38122 312 aa1.31□□□□□ -2.2
CSI1YMR025W ECM33P38248 429 aaKnown RBP1.31□□□□□ -2.2
CSI1YMR025W RMD6P39975 231 aa1.31□□□□□ -2.2
CSI1YMR025W COX15P40086 486 aa1.31□□□□□ -2.2
CSI1YMR025W TIR3P40552 269 aa1.31□□□□□ -2.2
CSI1YMR025W HAM1P47119 197 aaKnown RBP1.31□□□□□ -2.2
CSI1YMR025W ILM1P47155 203 aa1.31□□□□□ -2.2
CSI1YMR025W XPT1P47165 209 aa1.31□□□□□ -2.2
CSI1YMR025W CCC1P47818 322 aa1.31□□□□□ -2.2
CSI1YMR025W PRM8P53174 237 aa1.31□□□□□ -2.2
CSI1YMR025W YGR026WP53217 278 aa1.31□□□□□ -2.2
CSI1YMR025W PGA1P53896 198 aa1.31□□□□□ -2.2
CSI1YMR025W YKR005CQ02203 525 aa1.31□□□□□ -2.2
CSI1YMR025W YPL067CQ02754 198 aa1.31□□□□□ -2.2
CSI1YMR025W RFU1Q08003 200 aa1.31□□□□□ -2.2
CSI1YMR025W YKL183C-AQ3E765 70 aa1.31□□□□□ -2.2
CSI1YMR025W YOR020W-AQ3E824 90 aa1.31□□□□□ -2.2
CSI1YMR025W YMR105W-AQ8TGS8 64 aa1.31□□□□□ -2.2
CSI1YMR025W CDC28P00546 298 aaKnown RBP1.3□□□□□ -2.2
CSI1YMR025W RPL25P04456 142 aaKnown RBP1.3□□□□□ -2.2
CSI1YMR025W YPR170W-BP0C5R9 85 aa1.3□□□□□ -2.2
CSI1YMR025W URA6P15700 204 aa1.3□□□□□ -2.2
CSI1YMR025W GRX2P17695 143 aaKnown RBP1.3□□□□□ -2.2
CSI1YMR025W OAC1P32332 324 aa1.3□□□□□ -2.2
CSI1YMR025W CBT1P36038 271 aaPredicted RBP1.3□□□□□ -2.2
CSI1YMR025W FIG1P38224 298 aa1.3□□□□□ -2.2
CSI1YMR025W IPT1P38954 527 aa1.3□□□□□ -2.2
CSI1YMR025W ERG28P40030 148 aa1.3□□□□□ -2.2
CSI1YMR025W DLS1P40366 167 aa1.3□□□□□ -2.2
CSI1YMR025W AGE2P40529 298 aa1.3□□□□□ -2.2
CSI1YMR025W MSS2P40990 351 aa1.3□□□□□ -2.2
CSI1YMR025W YJR056CP47115 236 aa1.3□□□□□ -2.2
CSI1YMR025W GAL83Q04739 417 aa1.3□□□□□ -2.2
CSI1YMR025W ELP6Q04868 273 aa1.3□□□□□ -2.2
CSI1YMR025W YMR226CQ05016 267 aaKnown RBP1.3□□□□□ -2.2
CSI1YMR025W PST2Q12335 198 aaKnown RBP1.3□□□□□ -2.2
CSI1YMR025W ATO3Q12359 275 aa1.3□□□□□ -2.2
CSI1YMR025W RPL28P02406 149 aaKnown RBP1.29□□□□□ -2.2
CSI1YMR025W RPL9AP05738 191 aaKnown RBP1.29□□□□□ -2.2
CSI1YMR025W YGL041W-AP0C5N3 154 aa1.29□□□□□ -2.2
CSI1YMR025W NHP6BP11633 99 aaKnown RBP1.29□□□□□ -2.2
CSI1YMR025W SNF4P12904 322 aa1.29□□□□□ -2.2
CSI1YMR025W FBA1P14540 359 aaKnown RBP1.29□□□□□ -2.2
CSI1YMR025W UBC8P28263 218 aa1.29□□□□□ -2.2
CSI1YMR025W CPR5P35176 225 aa1.29□□□□□ -2.2
CSI1YMR025W RIO2P40160 425 aaKnown RBP1.29□□□□□ -2.2
CSI1YMR025W YNL194CP40169 301 aa1.29□□□□□ -2.2
CSI1YMR025W TTI2P47168 421 aa1.29□□□□□ -2.2
CSI1YMR025W MIC26P50087 233 aa1.29□□□□□ -2.2
CSI1YMR025W RPL9BP51401 191 aaKnown RBP1.29□□□□□ -2.2
CSI1YMR025W SAY1P53324 424 aa1.29□□□□□ -2.2
CSI1YMR025W COG5P53951 403 aa1.29□□□□□ -2.2
CSI1YMR025W VPS71Q03433 280 aa1.29□□□□□ -2.2
CSI1YMR025W MRPS8Q03799 155 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 273.5 ms