RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	PNC1	P53184	216 aa	Known RBP	5.03	□□□□□ -1.6
TSR2	YLR435W	YGR018C	P53211	109 aa		5.03	□□□□□ -1.6
TSR2	YLR435W	YMR082C	Q04276	118 aa		5.03	□□□□□ -1.6
TSR2	YLR435W	YPS3	Q12303	508 aa		5.03	□□□□□ -1.6
TSR2	YLR435W	RPL13A	Q12690	199 aa	Predicted RBP	5.03	□□□□□ -1.6
TSR2	YLR435W	YMR316C-A	I2HB70	103 aa		5.02	□□□□□ -1.61
TSR2	YLR435W	ELO2	P25358	347 aa		5.02	□□□□□ -1.61
TSR2	YLR435W	YCR022C	P25620	114 aa		5.02	□□□□□ -1.61
TSR2	YLR435W	SLM6	P38343	150 aa		5.02	□□□□□ -1.61
TSR2	YLR435W	BDH1	P39714	382 aa		5.02	□□□□□ -1.61
TSR2	YLR435W	HAM1	P47119	197 aa	Known RBP	5.02	□□□□□ -1.61
TSR2	YLR435W	LST7	P53237	242 aa		5.02	□□□□□ -1.61
TSR2	YLR435W	GRH1	Q04410	372 aa	Known RBP	5.02	□□□□□ -1.61
TSR2	YLR435W	CYC3	P06182	269 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	UTR5	P32630	166 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	UPS2	P35200	230 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	AVT5	P38176	459 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	MST28	P39552	234 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	YNL194C	P40169	301 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	YPI1	P43587	155 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	MST27	P53176	234 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	MSC3	Q05812	728 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	AGC1	Q12482	902 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	TAR1	Q8TGM6	124 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	YHR213W-A	Q8TGT4	77 aa		5.01	□□□□□ -1.61
TSR2	YLR435W	PIS1	P06197	220 aa	Known RBP	5	□□□□□ -1.61
TSR2	YLR435W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
TSR2	YLR435W	MAG1	P22134	296 aa	Known RBP	5	□□□□□ -1.61
TSR2	YLR435W	ECM33	P38248	429 aa	Known RBP	5	□□□□□ -1.61
TSR2	YLR435W	SDH8	P38345	138 aa		5	□□□□□ -1.61
TSR2	YLR435W	YGR269W	P40326	108 aa		5	□□□□□ -1.61
TSR2	YLR435W	TAD2	P47058	250 aa		5	□□□□□ -1.61
TSR2	YLR435W	ERV25	P54837	211 aa	Known RBP	5	□□□□□ -1.61
TSR2	YLR435W	TIM18	Q08749	192 aa		5	□□□□□ -1.61
TSR2	YLR435W	FCF2	Q12035	217 aa	Predicted RBP	5	□□□□□ -1.61
TSR2	YLR435W	PRR2	Q12310	699 aa		5	□□□□□ -1.61
TSR2	YLR435W	ISN1	Q99312	450 aa		5	□□□□□ -1.61
TSR2	YLR435W	CDC7	P06243	507 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	COQ3	P27680	312 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	ALK2	P32789	676 aa	Predicted RBP	4.99	□□□□□ -1.61
TSR2	YLR435W	SHB17	P36136	271 aa	Known RBP	4.99	□□□□□ -1.61
TSR2	YLR435W	SIM1	P40472	476 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	ATG27	P46989	271 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	YJL027C	P47063	138 aa	Predicted RBP	4.99	□□□□□ -1.61
TSR2	YLR435W	ECM27	P47144	725 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	OCA2	P53949	197 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	CTR3	Q06686	241 aa		4.99	□□□□□ -1.61
TSR2	YLR435W	BER1	Q06688	274 aa	Known RBP	4.99	□□□□□ -1.61
TSR2	YLR435W	YHR213W	P0CI67	198 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	GCN3	P14741	305 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	POP5	P28005	173 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	CSH1	P38287	376 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	YEA4	P40004	342 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	SWM2	P40342	146 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	POR2	P40478	281 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	RTS2	P40962	232 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	JAC1	P53193	184 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	YGR025W	P53216	100 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	ODC1	Q03028	310 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	YMR007W	Q03675	126 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	SHH3	Q04487	196 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	RRG8	Q06109	277 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	ATG39	Q06159	398 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	YDL242W	Q07746	117 aa		4.98	□□□□□ -1.61
TSR2	YLR435W	CDC50	P25656	391 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
TSR2	YLR435W	MPC2	P38857	129 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	GLE2	P40066	365 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	MIC27	P50945	234 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	YDR274C	P87283	123 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	TRI1	Q05024	226 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	ANT1	Q06497	328 aa		4.97	□□□□□ -1.61
TSR2	YLR435W	SPO13	P23624	291 aa		4.96	□□□□□ -1.62
TSR2	YLR435W	YBL059W	P34224	193 aa		4.96	□□□□□ -1.62
TSR2	YLR435W	BOR1	P53838	576 aa		4.96	□□□□□ -1.62
TSR2	YLR435W	YLR281C	Q05863	155 aa		4.96	□□□□□ -1.62
TSR2	YLR435W	TMA17	Q12513	150 aa		4.96	□□□□□ -1.62
TSR2	YLR435W	YOR011W-A	Q3E807	68 aa		4.96	□□□□□ -1.62
TSR2	YLR435W	FPR2	P32472	135 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	SIP1	P32578	815 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	LSM2	P38203	95 aa	Known RBP	4.95	□□□□□ -1.62
TSR2	YLR435W	DER1	P38307	211 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	FLO5	P38894	1075 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	SNF11	P38956	169 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	LCB3	P47013	409 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	HST4	P53688	370 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	PLP1	Q04004	230 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	SDH7	Q04401	133 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	LDS2	Q08218	356 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	AYT1	Q12226	474 aa		4.95	□□□□□ -1.62
TSR2	YLR435W	COX2	P00410	251 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	AHT1	P29589	182 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	AUA1	P32450	94 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	SDH4	P37298	181 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	SFT2	P38166	215 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	PET100	P38958	111 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	TDA4	P47153	279 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	YLR179C	Q06252	201 aa	Known RBP	4.94	□□□□□ -1.62
TSR2	YLR435W	YOR015W	Q12169	119 aa		4.94	□□□□□ -1.62
TSR2	YLR435W	UBI4	P0CG63	381 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms