RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C RPL14AP36105 138 aaKnown RBP2.39□□□□□ -2.03
ATG27YJL178C YBR096WP38256 230 aa2.39□□□□□ -2.03
ATG27YJL178C ERV15P38312 142 aa2.39□□□□□ -2.03
ATG27YJL178C YMR262WP38430 313 aa2.39□□□□□ -2.03
ATG27YJL178C PRS2P38620 318 aaKnown RBP2.39□□□□□ -2.03
ATG27YJL178C PRS3P38689 320 aaKnown RBP2.39□□□□□ -2.03
ATG27YJL178C RPL14BP38754 138 aaKnown RBP2.39□□□□□ -2.03
ATG27YJL178C RTC3P38804 111 aaPredicted RBP2.39□□□□□ -2.03
ATG27YJL178C YEA4P40004 342 aa2.39□□□□□ -2.03
ATG27YJL178C PCL7P40186 285 aa2.39□□□□□ -2.03
ATG27YJL178C CCS1P40202 249 aaKnown RBP2.39□□□□□ -2.03
ATG27YJL178C GON7P46984 123 aa2.39□□□□□ -2.03
ATG27YJL178C MRX5P47007 382 aa2.39□□□□□ -2.03
ATG27YJL178C SIP18P50263 79 aa2.39□□□□□ -2.03
ATG27YJL178C RIM9Q04734 239 aa2.39□□□□□ -2.03
ATG27YJL178C YPR098CQ06089 161 aa2.39□□□□□ -2.03
ATG27YJL178C YOL029CQ08187 201 aa2.39□□□□□ -2.03
ATG27YJL178C YOR292CQ08743 309 aa2.39□□□□□ -2.03
ATG27YJL178C PRR2Q12310 699 aa2.39□□□□□ -2.03
ATG27YJL178C DGK1Q12382 290 aa2.39□□□□□ -2.03
ATG27YJL178C SPO24Q3E752 67 aa2.39□□□□□ -2.03
ATG27YJL178C YAL067W-AQ8TGK6 75 aa2.39□□□□□ -2.03
ATG27YJL178C TRA1P38811 3744 aa2.38□□□□□ -2.03
ATG27YJL178C RPL39P04650 51 aa2.38□□□□□ -2.03
ATG27YJL178C BGL2P15703 313 aaKnown RBP2.38□□□□□ -2.03
ATG27YJL178C SPO13P23624 291 aa2.38□□□□□ -2.03
ATG27YJL178C AHT1P29589 182 aa2.38□□□□□ -2.03
ATG27YJL178C CLB6P32943 380 aa2.38□□□□□ -2.03
ATG27YJL178C UPS2P35200 230 aa2.38□□□□□ -2.03
ATG27YJL178C ATG8P38182 117 aaRIP-Chip data2.38□□□□□ -2.03not detected
ATG27YJL178C YBR013CP38215 129 aa2.38□□□□□ -2.03
ATG27YJL178C SLM6P38343 150 aa2.38□□□□□ -2.03
ATG27YJL178C IKI1P38874 309 aa2.38□□□□□ -2.03
ATG27YJL178C RMD6P39975 231 aa2.38□□□□□ -2.03
ATG27YJL178C YGR269WP40326 108 aa2.38□□□□□ -2.03
ATG27YJL178C VMA21P41806 77 aa2.38□□□□□ -2.03
ATG27YJL178C DAN1P47178 298 aa2.38□□□□□ -2.03
ATG27YJL178C UBC13P52490 153 aa2.38□□□□□ -2.03
ATG27YJL178C GEP7P53171 287 aa2.38□□□□□ -2.03
ATG27YJL178C HSK3P69852 69 aa2.38□□□□□ -2.03
ATG27YJL178C MRPS17Q03246 237 aaPredicted RBP2.38□□□□□ -2.03
ATG27YJL178C TMA23Q03525 211 aa2.38□□□□□ -2.03
ATG27YJL178C YMR090WQ04304 227 aaKnown RBP2.38□□□□□ -2.03
ATG27YJL178C ECM18Q04623 453 aa2.38□□□□□ -2.03
ATG27YJL178C YPL264CQ08980 353 aa2.38□□□□□ -2.03
ATG27YJL178C RAD28Q12021 506 aa2.38□□□□□ -2.03
ATG27YJL178C POC4Q12245 148 aaPredicted RBP2.38□□□□□ -2.03
ATG27YJL178C ATG40Q99325 256 aa2.38□□□□□ -2.03
ATG27YJL178C SAL1D6W196 494 aa2.37□□□□□ -2.03
ATG27YJL178C URA5P13298 226 aaKnown RBP2.37□□□□□ -2.03
ATG27YJL178C RPB3P16370 318 aaKnown RBP2.37□□□□□ -2.03
ATG27YJL178C APA2P22108 325 aa2.37□□□□□ -2.03
ATG27YJL178C POF1P25576 258 aa2.37□□□□□ -2.03
ATG27YJL178C YCR101CP25607 182 aa2.37□□□□□ -2.03
ATG27YJL178C YUH1P35127 236 aa2.37□□□□□ -2.03
ATG27YJL178C CTR2P38865 189 aa2.37□□□□□ -2.03
ATG27YJL178C PET100P38958 111 aa2.37□□□□□ -2.03
ATG27YJL178C SEN34P39707 275 aa2.37□□□□□ -2.03
ATG27YJL178C SPC25P40014 221 aa2.37□□□□□ -2.03
ATG27YJL178C SLM1P40485 686 aa2.37□□□□□ -2.03
ATG27YJL178C ARP3P47117 449 aaKnown RBP2.37□□□□□ -2.03
ATG27YJL178C RPN14P53196 417 aa2.37□□□□□ -2.03
ATG27YJL178C YGR050CP53231 118 aa2.37□□□□□ -2.03
ATG27YJL178C HHO1P53551 258 aa2.37□□□□□ -2.03
ATG27YJL178C YNR066CP53752 436 aa2.37□□□□□ -2.03
ATG27YJL178C HCH1P53834 153 aa2.37□□□□□ -2.03
ATG27YJL178C YDC1Q02896 317 aa2.37□□□□□ -2.03
ATG27YJL178C RSM10Q03201 203 aa2.37□□□□□ -2.03
ATG27YJL178C UPS1Q05776 175 aa2.37□□□□□ -2.03
ATG27YJL178C RFM1Q12192 310 aa2.37□□□□□ -2.03
ATG27YJL178C YPS3Q12303 508 aa2.37□□□□□ -2.03
ATG27YJL178C AGC1Q12482 902 aa2.37□□□□□ -2.03
ATG27YJL178C YMR105W-AQ8TGS8 64 aa2.37□□□□□ -2.03
ATG27YJL178C RPL35AP0CX84 120 aaKnown RBP2.36□□□□□ -2.03
ATG27YJL178C RPL35BP0CX85 120 aaKnown RBP2.36□□□□□ -2.03
ATG27YJL178C FCY2P17064 533 aa2.36□□□□□ -2.03
ATG27YJL178C ROX3P25046 220 aa2.36□□□□□ -2.03
ATG27YJL178C RPS0AP32905 252 aaKnown RBP2.36□□□□□ -2.03
ATG27YJL178C SHB17P36136 271 aaKnown RBP2.36□□□□□ -2.03
ATG27YJL178C SDH4P37298 181 aa2.36□□□□□ -2.03
ATG27YJL178C YHL037CP38733 133 aa2.36□□□□□ -2.03
ATG27YJL178C RPL13BP40212 199 aaKnown RBP2.36□□□□□ -2.03
ATG27YJL178C POG1P40473 351 aa2.36□□□□□ -2.03
ATG27YJL178C PIR5P46999 287 aa2.36□□□□□ -2.03
ATG27YJL178C PDR17P53844 350 aa2.36□□□□□ -2.03
ATG27YJL178C FYV6P53913 173 aa2.36□□□□□ -2.03
ATG27YJL178C SED1Q01589 338 aa2.36□□□□□ -2.03
ATG27YJL178C DYN2Q02647 92 aa2.36□□□□□ -2.03
ATG27YJL178C YMR007WQ03675 126 aa2.36□□□□□ -2.03
ATG27YJL178C YHP1Q04116 353 aa2.36□□□□□ -2.03
ATG27YJL178C AVO2Q04749 426 aa2.36□□□□□ -2.03
ATG27YJL178C DXO1Q06349 442 aa2.36□□□□□ -2.03
ATG27YJL178C YPL278CQ08990 100 aa2.36□□□□□ -2.03
ATG27YJL178C RPL13AQ12690 199 aaPredicted RBP2.36□□□□□ -2.03
ATG27YJL178C BOL1Q3E793 110 aa2.36□□□□□ -2.03
ATG27YJL178C YOS1Q3E834 85 aa2.36□□□□□ -2.03
ATG27YJL178C RPS25BP0C0T4 108 aaKnown RBP2.35□□□□□ -2.03
ATG27YJL178C PRY2P36110 329 aa2.35□□□□□ -2.03
ATG27YJL178C COX15P40086 486 aa2.35□□□□□ -2.03
ATG27YJL178C PGD1P40356 397 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms