RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W RAD23P32628 398 aaKnown RBP9.14□□□□□ -0.95
SIM1YIL123W IMD2P38697 523 aaKnown RBP9.14□□□□□ -0.95
SIM1YIL123W YIL012WP40551 113 aa9.14□□□□□ -0.95
SIM1YIL123W YJL213WP40896 331 aa9.14□□□□□ -0.95
SIM1YIL123W GZF3P42944 551 aaKnown RBP9.14□□□□□ -0.95
SIM1YIL123W GPI2P46961 280 aa9.14□□□□□ -0.95
SIM1YIL123W YGR018CP53211 109 aa9.14□□□□□ -0.95
SIM1YIL123W LST7P53237 242 aa9.14□□□□□ -0.95
SIM1YIL123W FYV6P53913 173 aa9.14□□□□□ -0.95
SIM1YIL123W DXO1Q06349 442 aa9.14□□□□□ -0.95
SIM1YIL123W LDS2Q08218 356 aa9.14□□□□□ -0.95
SIM1YIL123W PAA1Q12447 191 aaKnown RBP9.14□□□□□ -0.95
SIM1YIL123W ILV5P06168 395 aaKnown RBP9.13□□□□□ -0.95
SIM1YIL123W YJL163CP46996 555 aa9.13□□□□□ -0.95
SIM1YIL123W DAD3P69850 94 aa9.13□□□□□ -0.95
SIM1YIL123W NDE2Q07500 545 aa9.13□□□□□ -0.95
SIM1YIL123W RKI1Q12189 258 aa9.13□□□□□ -0.95
SIM1YIL123W CDS1P38221 457 aa9.12□□□□□ -0.95
SIM1YIL123W ATG27P46989 271 aa9.12□□□□□ -0.95
SIM1YIL123W YGR151CP53287 111 aa9.12□□□□□ -0.95
SIM1YIL123W CSI2Q08054 341 aa9.12□□□□□ -0.95
SIM1YIL123W FMP49A0A023PZB3 126 aa9.11□□□□□ -0.95
SIM1YIL123W RPS2P25443 254 aaKnown RBP9.11□□□□□ -0.95
SIM1YIL123W YCR022CP25620 114 aa9.11□□□□□ -0.95
SIM1YIL123W ICS2P38284 255 aa9.11□□□□□ -0.95
SIM1YIL123W HIT1P46973 164 aa9.11□□□□□ -0.95
SIM1YIL123W STP4Q07351 490 aa9.11□□□□□ -0.95
SIM1YIL123W MCH1Q07376 486 aa9.11□□□□□ -0.95
SIM1YIL123W RDL1Q12305 139 aaKnown RBP9.11□□□□□ -0.95
SIM1YIL123W PAU19P0CE85 124 aa9.1□□□□□ -0.95
SIM1YIL123W PAU21P0CE86 164 aa9.1□□□□□ -0.95
SIM1YIL123W PAU22P0CE87 164 aa9.1□□□□□ -0.95
SIM1YIL123W PAU3P25610 124 aa9.1□□□□□ -0.95
SIM1YIL123W SUR2P38992 349 aa9.1□□□□□ -0.95
SIM1YIL123W PAU5P43575 122 aa9.1□□□□□ -0.95
SIM1YIL123W JID1Q12350 301 aa9.1□□□□□ -0.95
SIM1YIL123W DFR1P07807 211 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
SIM1YIL123W ABM1P47146 123 aa9.09□□□□□ -0.95
SIM1YIL123W APS2Q00381 147 aa9.09□□□□□ -0.95
SIM1YIL123W FCY1Q12178 158 aa9.09□□□□□ -0.95
SIM1YIL123W CMC2Q3E7A4 109 aa9.09□□□□□ -0.95
SIM1YIL123W BPH1P25356 2167 aa9.09□□□□□ -0.95
SIM1YIL123W HSP12P22943 109 aaKnown RBP9.08□□□□□ -0.96
SIM1YIL123W SRP21P32342 167 aa9.08□□□□□ -0.96
SIM1YIL123W AVT5P38176 459 aa9.08□□□□□ -0.96
SIM1YIL123W SDH8P38345 138 aa9.08□□□□□ -0.96
SIM1YIL123W DOG2P38773 246 aa9.08□□□□□ -0.96
SIM1YIL123W DOG1P38774 246 aa9.08□□□□□ -0.96
SIM1YIL123W GET2P40056 285 aa9.08□□□□□ -0.96
SIM1YIL123W YFL054CP43549 646 aa9.08□□□□□ -0.96
SIM1YIL123W BNA1P47096 177 aa9.08□□□□□ -0.96
SIM1YIL123W RPL43AP0CX25 92 aaKnown RBP9.07□□□□□ -0.96
SIM1YIL123W RPL43BP0CX26 92 aa9.07□□□□□ -0.96
SIM1YIL123W PHO85P17157 305 aa9.07□□□□□ -0.96
SIM1YIL123W YNR071CP53757 342 aa9.07□□□□□ -0.96
SIM1YIL123W SDH7Q04401 133 aa9.07□□□□□ -0.96
SIM1YIL123W NAT3Q06504 195 aa9.07□□□□□ -0.96
SIM1YIL123W YNK1P36010 153 aaKnown RBP9.06□□□□□ -0.96
SIM1YIL123W YHR173CP38864 112 aa9.06□□□□□ -0.96
SIM1YIL123W YIL163CP40448 117 aa9.06□□□□□ -0.96
SIM1YIL123W TMA10Q06177 86 aa9.06□□□□□ -0.96
SIM1YIL123W YOR352WQ08816 343 aa9.06□□□□□ -0.96
SIM1YIL123W GEP5Q12393 293 aa9.06□□□□□ -0.96
SIM1YIL123W DCN1Q12395 269 aa9.06□□□□□ -0.96
SIM1YIL123W LAS17Q12446 633 aa9.06□□□□□ -0.96
SIM1YIL123W VMA11P32842 164 aa9.05□□□□□ -0.96
SIM1YIL123W NNK1P36003 928 aa9.05□□□□□ -0.96
SIM1YIL123W SFT2P38166 215 aa9.05□□□□□ -0.96
SIM1YIL123W OCA2P53949 197 aa9.05□□□□□ -0.96
SIM1YIL123W ARL3Q02804 198 aa9.05□□□□□ -0.96
SIM1YIL123W RXT3Q07458 294 aa9.05□□□□□ -0.96
SIM1YIL123W FIT2Q08906 153 aa9.05□□□□□ -0.96
SIM1YIL123W SMT3Q12306 101 aaKnown RBP9.05□□□□□ -0.96
SIM1YIL123W PHD1P36093 366 aa9.05□□□□□ -0.96
SIM1YIL123W RRT1P38192 103 aa9.05□□□□□ -0.96
SIM1YIL123W PRE3P38624 215 aa9.05□□□□□ -0.96
SIM1YIL123W SRP14P38985 146 aa9.05□□□□□ -0.96
SIM1YIL123W HST4P53688 370 aa9.05□□□□□ -0.96
SIM1YIL123W MRX11Q03079 207 aa9.05□□□□□ -0.96
SIM1YIL123W Q0297Q9ZZV8 51 aa9.05□□□□□ -0.96
SIM1YIL123W SUA7P29055 345 aaPredicted RBP9.04□□□□□ -0.96
SIM1YIL123W CPD1P53314 239 aa9.04□□□□□ -0.96
SIM1YIL123W AYT1Q12226 474 aa9.04□□□□□ -0.96
SIM1YIL123W YGL010WP25338 174 aa9.03□□□□□ -0.96
SIM1YIL123W LSM2P38203 95 aaKnown RBP9.03□□□□□ -0.96
SIM1YIL123W IRC22P40006 225 aa9.02□□□□□ -0.97
SIM1YIL123W GPP2P40106 250 aaKnown RBP9.02□□□□□ -0.97
SIM1YIL123W YGL185CP53100 379 aa9.02□□□□□ -0.97
SIM1YIL123W YMR317WQ04893 1140 aa9.02□□□□□ -0.97
SIM1YIL123W MRPL38P35996 138 aaPredicted RBP9.01□□□□□ -0.97
SIM1YIL123W ATP19P81451 68 aa9.01□□□□□ -0.97
SIM1YIL123W DDI2P0CH63 225 aa9□□□□□ -0.97
SIM1YIL123W DDI3P0CH64 225 aa9□□□□□ -0.97
SIM1YIL123W YHR213WP0CI67 198 aa9□□□□□ -0.97
SIM1YIL123W CUP1-1P0CX80 61 aa9□□□□□ -0.97
SIM1YIL123W CUP1-2P0CX81 61 aa9□□□□□ -0.97
SIM1YIL123W PRE9P23638 258 aaKnown RBP9□□□□□ -0.97
SIM1YIL123W YKL075CP36083 450 aa9□□□□□ -0.97
SIM1YIL123W MRPL28P36527 147 aa9□□□□□ -0.97
SIM1YIL123W PIC2P40035 300 aa9□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms