RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W TAR1Q8TGM6 124 aa3.89□□□□□ -1.79
RPN12YFR052W YHR213W-AQ8TGT4 77 aa3.89□□□□□ -1.79
RPN12YFR052W CYC3P06182 269 aa3.88□□□□□ -1.79
RPN12YFR052W GCN3P14741 305 aa3.88□□□□□ -1.79
RPN12YFR052W MDM10P18409 493 aa3.88□□□□□ -1.79
RPN12YFR052W MAG1P22134 296 aaKnown RBP3.88□□□□□ -1.79
RPN12YFR052W YJL027CP47063 138 aaPredicted RBP3.88□□□□□ -1.79
RPN12YFR052W HAM1P47119 197 aaKnown RBP3.88□□□□□ -1.79
RPN12YFR052W GRH1Q04410 372 aaKnown RBP3.88□□□□□ -1.79
RPN12YFR052W BER1Q06688 274 aaKnown RBP3.88□□□□□ -1.79
RPN12YFR052W YDL242WQ07746 117 aa3.88□□□□□ -1.79
RPN12YFR052W TIM18Q08749 192 aa3.88□□□□□ -1.79
RPN12YFR052W ISN1Q99312 450 aa3.88□□□□□ -1.79
RPN12YFR052W CDC7P06243 507 aa3.87□□□□□ -1.79
RPN12YFR052W DFR1P07807 211 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
RPN12YFR052W POP5P28005 173 aa3.87□□□□□ -1.79
RPN12YFR052W UTR5P32630 166 aa3.87□□□□□ -1.79
RPN12YFR052W SHB17P36136 271 aaKnown RBP3.87□□□□□ -1.79
RPN12YFR052W AVT5P38176 459 aa3.87□□□□□ -1.79
RPN12YFR052W GLE2P40066 365 aa3.87□□□□□ -1.79
RPN12YFR052W YNL194CP40169 301 aa3.87□□□□□ -1.79
RPN12YFR052W YPI1P43587 155 aa3.87□□□□□ -1.79
RPN12YFR052W ATG27P46989 271 aa3.87□□□□□ -1.79
RPN12YFR052W JAC1P53193 184 aa3.87□□□□□ -1.79
RPN12YFR052W YGR025WP53216 100 aa3.87□□□□□ -1.79
RPN12YFR052W OCA2P53949 197 aa3.87□□□□□ -1.79
RPN12YFR052W YMR007WQ03675 126 aa3.87□□□□□ -1.79
RPN12YFR052W SHH3Q04487 196 aa3.87□□□□□ -1.79
RPN12YFR052W ANT1Q06497 328 aa3.87□□□□□ -1.79
RPN12YFR052W CTR3Q06686 241 aa3.87□□□□□ -1.79
RPN12YFR052W YHR213WP0CI67 198 aa3.86□□□□□ -1.79
RPN12YFR052W FRS1P15624 595 aaKnown RBP3.86□□□□□ -1.79
RPN12YFR052W CDC50P25656 391 aa3.86□□□□□ -1.79
RPN12YFR052W ALK2P32789 676 aaPredicted RBP3.86□□□□□ -1.79
RPN12YFR052W ECM33P38248 429 aaKnown RBP3.86□□□□□ -1.79
RPN12YFR052W CSH1P38287 376 aa3.86□□□□□ -1.79
RPN12YFR052W YEA4P40004 342 aa3.86□□□□□ -1.79
RPN12YFR052W SWM2P40342 146 aa3.86□□□□□ -1.79
RPN12YFR052W SIM1P40472 476 aa3.86□□□□□ -1.79
RPN12YFR052W RTS2P40962 232 aa3.86□□□□□ -1.79
RPN12YFR052W ECM27P47144 725 aa3.86□□□□□ -1.79
RPN12YFR052W COX18P53239 316 aa3.86□□□□□ -1.79
RPN12YFR052W ERV25P54837 211 aaKnown RBP3.86□□□□□ -1.79
RPN12YFR052W ODC1Q03028 310 aa3.86□□□□□ -1.79
RPN12YFR052W MSC3Q05812 728 aa3.86□□□□□ -1.79
RPN12YFR052W ATG39Q06159 398 aa3.86□□□□□ -1.79
RPN12YFR052W SPO13P23624 291 aa3.85□□□□□ -1.79
RPN12YFR052W YBL059WP34224 193 aa3.85□□□□□ -1.79
RPN12YFR052W LSM2P38203 95 aaKnown RBP3.85□□□□□ -1.79
RPN12YFR052W POR2P40478 281 aa3.85□□□□□ -1.79
RPN12YFR052W MIC27P50945 234 aa3.85□□□□□ -1.79
RPN12YFR052W PLP1Q04004 230 aa3.85□□□□□ -1.79
RPN12YFR052W YOR015WQ12169 119 aa3.85□□□□□ -1.79
RPN12YFR052W YBR298C-AQ8TGK4 73 aa3.85□□□□□ -1.79
RPN12YFR052W UBI4P0CG63 381 aaKnown RBP3.84□□□□□ -1.79
RPN12YFR052W CDC43P18898 376 aa3.84□□□□□ -1.79
RPN12YFR052W AHT1P29589 182 aa3.84□□□□□ -1.79
RPN12YFR052W DER1P38307 211 aa3.84□□□□□ -1.79
RPN12YFR052W MPC2P38857 129 aa3.84□□□□□ -1.79
RPN12YFR052W FLO5P38894 1075 aa3.84□□□□□ -1.79
RPN12YFR052W GCV3P39726 170 aaPredicted RBP3.84□□□□□ -1.79
RPN12YFR052W LCB3P47013 409 aa3.84□□□□□ -1.79
RPN12YFR052W HST4P53688 370 aa3.84□□□□□ -1.79
RPN12YFR052W MRPL50P53724 139 aa3.84□□□□□ -1.79
RPN12YFR052W BOR1P53838 576 aa3.84□□□□□ -1.79
RPN12YFR052W YDR274CP87283 123 aa3.84□□□□□ -1.79
RPN12YFR052W TRI1Q05024 226 aa3.84□□□□□ -1.79
RPN12YFR052W AYT1Q12226 474 aa3.84□□□□□ -1.79
RPN12YFR052W YOR011W-AQ3E807 68 aa3.84□□□□□ -1.79
RPN12YFR052W FPR2P32472 135 aa3.83□□□□□ -1.8
RPN12YFR052W SIP1P32578 815 aa3.83□□□□□ -1.8
RPN12YFR052W EMP24P32803 203 aaKnown RBP3.83□□□□□ -1.8
RPN12YFR052W YRA2P36036 203 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
RPN12YFR052W SFT2P38166 215 aa3.83□□□□□ -1.8
RPN12YFR052W VMA22P38784 181 aa3.83□□□□□ -1.8
RPN12YFR052W PET100P38958 111 aa3.83□□□□□ -1.8
RPN12YFR052W ASP1P38986 381 aaPredicted RBP3.83□□□□□ -1.8
RPN12YFR052W IMP2P46972 177 aa3.83□□□□□ -1.8
RPN12YFR052W TDA4P47153 279 aa3.83□□□□□ -1.8
RPN12YFR052W MRPS17Q03246 237 aaPredicted RBP3.83□□□□□ -1.8
RPN12YFR052W SDH7Q04401 133 aa3.83□□□□□ -1.8
RPN12YFR052W AVO2Q04749 426 aa3.83□□□□□ -1.8
RPN12YFR052W RRG8Q06109 277 aa3.83□□□□□ -1.8
RPN12YFR052W YLR179CQ06252 201 aaKnown RBP3.83□□□□□ -1.8
RPN12YFR052W STP4Q07351 490 aa3.83□□□□□ -1.8
RPN12YFR052W LDS2Q08218 356 aa3.83□□□□□ -1.8
RPN12YFR052W YDR157WA0A023PZE8 133 aa3.82□□□□□ -1.8
RPN12YFR052W RPS2P25443 254 aaKnown RBP3.82□□□□□ -1.8
RPN12YFR052W AUA1P32450 94 aa3.82□□□□□ -1.8
RPN12YFR052W TIR2P33890 251 aa3.82□□□□□ -1.8
RPN12YFR052W CMC1P36064 111 aa3.82□□□□□ -1.8
RPN12YFR052W SDH4P37298 181 aa3.82□□□□□ -1.8
RPN12YFR052W NRG2P38082 220 aa3.82□□□□□ -1.8
RPN12YFR052W SNF11P38956 169 aa3.82□□□□□ -1.8
RPN12YFR052W ADD37Q03233 198 aa3.82□□□□□ -1.8
RPN12YFR052W COA4Q05809 96 aa3.82□□□□□ -1.8
RPN12YFR052W YLR281CQ05863 155 aa3.82□□□□□ -1.8
RPN12YFR052W PRM7Q12459 698 aa3.82□□□□□ -1.8
RPN12YFR052W COX2P00410 251 aa3.81□□□□□ -1.8
RPN12YFR052W MRP2P10663 115 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms