RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeast

Gene PRE4, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE4	YFR050C	YIL002W-A	Q3E7Z5	69 aa		0.94	□□□□□ -2.26
PRE4	YFR050C	MHF2	Q3E829	80 aa		0.94	□□□□□ -2.26
PRE4	YFR050C	SAS5	Q99314	248 aa		0.94	□□□□□ -2.26
PRE4	YFR050C	RTC6	O14464	93 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	POF1	P25576	258 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	BIG1	P38813	335 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	SPC1	P46965	94 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	ERV29	P53337	310 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	ATC1	Q04005	294 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	YOR011W-A	Q3E807	68 aa		0.93	□□□□□ -2.26
PRE4	YFR050C	SCM4	P32564	187 aa		0.92	□□□□□ -2.26
PRE4	YFR050C	MPC1	P53157	130 aa	Known RBP	0.92	□□□□□ -2.26
PRE4	YFR050C	AAH1	P53909	347 aa		0.92	□□□□□ -2.26
PRE4	YFR050C	HSK3	P69852	69 aa		0.92	□□□□□ -2.26
PRE4	YFR050C	FMP16	Q12497	93 aa		0.92	□□□□□ -2.26
PRE4	YFR050C	CMD1	P06787	147 aa	Known RBP	0.91	□□□□□ -2.26
PRE4	YFR050C	CBF1	P17106	351 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	BUB2	P26448	306 aa	Predicted RBP	0.91	□□□□□ -2.26
PRE4	YFR050C	FCY21	P40039	528 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	IRC18	P47056	224 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	YGL149W	P53116	101 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	YKR005C	Q02203	525 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	RRN5	Q02983	363 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	BOL1	Q3E793	110 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	YBL008W-A	Q3E821	79 aa		0.91	□□□□□ -2.26
PRE4	YFR050C	RPS1B	P23248	255 aa	Known RBP	0.9	□□□□□ -2.27
PRE4	YFR050C	YKL070W	P36087	169 aa		0.9	□□□□□ -2.27
PRE4	YFR050C	OST2	P46964	130 aa		0.9	□□□□□ -2.27
PRE4	YFR050C	FMP33	P46998	180 aa		0.9	□□□□□ -2.27
PRE4	YFR050C	YJR015W	P47090	510 aa		0.9	□□□□□ -2.27
PRE4	YFR050C	NUP57	P48837	541 aa		0.9	□□□□□ -2.27
PRE4	YFR050C	DML1	Q03652	475 aa		0.9	□□□□□ -2.27
PRE4	YFR050C	SME1	Q12330	94 aa	Predicted RBP	0.9	□□□□□ -2.27
PRE4	YFR050C	RPS11A	P0CX47	156 aa	Known RBP	0.89	□□□□□ -2.27
PRE4	YFR050C	RPS11B	P0CX48	156 aa	Known RBP	0.89	□□□□□ -2.27
PRE4	YFR050C	CCA1	P21269	546 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	SEC22	P22214	214 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	ARC19	P33204	171 aa	Known RBP	0.89	□□□□□ -2.27
PRE4	YFR050C	RCN1	P36054	211 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	CAF4	P36130	643 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	YGR025W	P53216	100 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	BUD25	P85052	153 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	YLR179C	Q06252	201 aa	Known RBP	0.89	□□□□□ -2.27
PRE4	YFR050C	YET3	Q07451	203 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	DAS2	Q12084	232 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	YPL119C-A	Q3E751	87 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	YKL018C-A	Q3E7A7	99 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	YOS1	Q3E834	85 aa		0.89	□□□□□ -2.27
PRE4	YFR050C	YHR032W-A	P0C5N6	59 aa		0.88	□□□□□ -2.27
PRE4	YFR050C	TIR3	P40552	269 aa		0.88	□□□□□ -2.27
PRE4	YFR050C	DAD3	P69850	94 aa		0.88	□□□□□ -2.27
PRE4	YFR050C	MRPS8	Q03799	155 aa		0.88	□□□□□ -2.27
PRE4	YFR050C	KRE28	Q04431	385 aa		0.88	□□□□□ -2.27
PRE4	YFR050C	COA4	Q05809	96 aa		0.88	□□□□□ -2.27
PRE4	YFR050C	RPL25	P04456	142 aa	Known RBP	0.87	□□□□□ -2.27
PRE4	YFR050C	FBA1	P14540	359 aa	Known RBP	0.87	□□□□□ -2.27
PRE4	YFR050C	COS8	P38723	381 aa		0.87	□□□□□ -2.27
PRE4	YFR050C	GLE2	P40066	365 aa		0.87	□□□□□ -2.27
PRE4	YFR050C	PEP8	P40335	379 aa		0.87	□□□□□ -2.27
PRE4	YFR050C	ARC15	P40518	154 aa	RIP-Chip data	0.87	□□□□□ -2.27	not detected
PRE4	YFR050C	CTF19	Q02732	369 aa		0.87	□□□□□ -2.27
PRE4	YFR050C	OST6	Q03723	332 aa		0.87	□□□□□ -2.27
PRE4	YFR050C	GRX3	Q03835	250 aa		0.87	□□□□□ -2.27
PRE4	YFR050C	SNF4	P12904	322 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	PEX4	P29340	183 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	SPS18	P32572	300 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	SRP102	P36057	244 aa	Predicted RBP	0.86	□□□□□ -2.27
PRE4	YFR050C	VTC1	P40046	129 aa	RIP-Chip data	0.86	□□□□□ -2.27	not detected
PRE4	YFR050C	AIM19	P40502	157 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	YGR026W	P53217	278 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	ATG17	Q06410	417 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	YPD1	Q07688	167 aa		0.86	□□□□□ -2.27
PRE4	YFR050C	RIO1	Q12196	484 aa	Known RBP	0.86	□□□□□ -2.27
PRE4	YFR050C	Q0255	P03881	472 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	RPL24A	P04449	155 aa	Known RBP	0.85	□□□□□ -2.27
PRE4	YFR050C	QRI5	P32344	111 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	ETR1	P38071	380 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	YHR125W	P38831	101 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	SVP26	P38869	228 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	YER135C	P40082	130 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	YGL159W	P53110	370 aa		0.85	□□□□□ -2.27
PRE4	YFR050C	RPL9A	P05738	191 aa	Known RBP	0.84	□□□□□ -2.27
PRE4	YFR050C	FZO1	P38297	855 aa		0.84	□□□□□ -2.27
PRE4	YFR050C	YGL034C	P53186	121 aa		0.84	□□□□□ -2.27
PRE4	YFR050C	RAV2	Q03956	351 aa		0.84	□□□□□ -2.27
PRE4	YFR050C	NEJ1	Q06148	342 aa		0.84	□□□□□ -2.27
PRE4	YFR050C	YOR192C-C	Q3E736	78 aa		0.84	□□□□□ -2.27
PRE4	YFR050C	KTI11	Q3E840	82 aa		0.84	□□□□□ -2.27
PRE4	YFR050C	ADK1	P07170	222 aa	Known RBP	0.83	□□□□□ -2.28
PRE4	YFR050C	MSA2	P36157	363 aa		0.83	□□□□□ -2.28
PRE4	YFR050C	SNU13	P39990	126 aa	Known RBP	0.83	□□□□□ -2.28
PRE4	YFR050C	NOP19	P53317	196 aa	Predicted RBP	0.83	□□□□□ -2.28
PRE4	YFR050C	RNH202	Q05635	350 aa		0.83	□□□□□ -2.28
PRE4	YFR050C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
PRE4	YFR050C	HUT1	Q12520	339 aa		0.83	□□□□□ -2.28
PRE4	YFR050C	YCR075W-A	Q3E830	75 aa		0.83	□□□□□ -2.28
PRE4	YFR050C	ATG40	Q99325	256 aa		0.83	□□□□□ -2.28
PRE4	YFR050C	YAR023C	D6VPM8	179 aa		0.82	□□□□□ -2.28
PRE4	YFR050C	HTB1	P02293	131 aa	Known RBP	0.82	□□□□□ -2.28
PRE4	YFR050C	UBC4	P15731	148 aa		0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms