RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	NIF3	P53081	288 aa		0.59	□□□□□ -2.32
UBP3	YER151C	YGR016W	P53209	190 aa		0.59	□□□□□ -2.32
UBP3	YER151C	YIP3	P53633	176 aa		0.59	□□□□□ -2.32
UBP3	YER151C	YPL077C	Q02831	240 aa		0.59	□□□□□ -2.32
UBP3	YER151C	CAB5	Q03941	241 aa		0.59	□□□□□ -2.32
UBP3	YER151C	ECM12	O13529	151 aa		0.58	□□□□□ -2.32
UBP3	YER151C	RAS2	P01120	322 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	IDP1	P21954	428 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	HOM6	P31116	359 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	YBR056W	P38081	501 aa		0.58	□□□□□ -2.32
UBP3	YER151C	MRPS9	P38120	278 aa		0.58	□□□□□ -2.32
UBP3	YER151C	SMP1	P38128	452 aa		0.58	□□□□□ -2.32
UBP3	YER151C	POP8	P38208	133 aa		0.58	□□□□□ -2.32
UBP3	YER151C	GEP4	P38812	185 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YHR180W	P38868	163 aa		0.58	□□□□□ -2.32
UBP3	YER151C	HSP10	P38910	106 aa		0.58	□□□□□ -2.32
UBP3	YER151C	SWM2	P40342	146 aa		0.58	□□□□□ -2.32
UBP3	YER151C	AIM19	P40502	157 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YJL027C	P47063	138 aa	Predicted RBP	0.58	□□□□□ -2.32
UBP3	YER151C	YJR111C	P47148	283 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	OST3	P48439	350 aa		0.58	□□□□□ -2.32
UBP3	YER151C	RRP17	Q04031	235 aa	Predicted RBP	0.58	□□□□□ -2.32
UBP3	YER151C	LPP1	Q04396	274 aa		0.58	□□□□□ -2.32
UBP3	YER151C	ATG17	Q06410	417 aa		0.58	□□□□□ -2.32
UBP3	YER151C	MED4	Q12343	284 aa		0.58	□□□□□ -2.32
UBP3	YER151C	RDI1	Q12434	202 aa		0.58	□□□□□ -2.32
UBP3	YER151C	COX7	P10174	60 aa		0.58	□□□□□ -2.32
UBP3	YER151C	ZRC1	P20107	442 aa		0.58	□□□□□ -2.32
UBP3	YER151C	PAM17	P36147	197 aa		0.58	□□□□□ -2.32
UBP3	YER151C	ECM8	P38246	354 aa		0.58	□□□□□ -2.32
UBP3	YER151C	ECM33	P38248	429 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	TEM1	P38987	245 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YFR057W	P43625	151 aa		0.58	□□□□□ -2.32
UBP3	YER151C	IRC18	P47056	224 aa		0.58	□□□□□ -2.32
UBP3	YER151C	HAM1	P47119	197 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	YPS5	P53057	165 aa		0.58	□□□□□ -2.32
UBP3	YER151C	LST7	P53237	242 aa		0.58	□□□□□ -2.32
UBP3	YER151C	SLX9	P53251	210 aa	Predicted RBP	0.58	□□□□□ -2.32
UBP3	YER151C	PAU12	P53343	120 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YDR042C	Q03205	200 aa		0.58	□□□□□ -2.32
UBP3	YER151C	AIM34	Q03673	198 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YMR082C	Q04276	118 aa		0.58	□□□□□ -2.32
UBP3	YER151C	FCF1	Q05498	189 aa	Predicted RBP	0.58	□□□□□ -2.32
UBP3	YER151C	FEX1	Q08913	375 aa		0.58	□□□□□ -2.32
UBP3	YER151C	FEX2	Q08991	375 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YDL199C	Q12407	687 aa		0.58	□□□□□ -2.32
UBP3	YER151C	DCP1	Q12517	231 aa	Predicted RBP	0.58	□□□□□ -2.32
UBP3	YER151C	KSH1	Q8TGJ3	72 aa		0.58	□□□□□ -2.32
UBP3	YER151C	RPL9A	P05738	191 aa	Known RBP	0.58	□□□□□ -2.32
UBP3	YER151C	UBC5	P15732	148 aa		0.58	□□□□□ -2.32
UBP3	YER151C	KRR1	P25586	316 aa	Predicted RBP	0.58	□□□□□ -2.32
UBP3	YER151C	HSP150	P32478	413 aa		0.58	□□□□□ -2.32
UBP3	YER151C	PTM1	P32857	523 aa		0.58	□□□□□ -2.32
UBP3	YER151C	MBA1	P38300	278 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YJL028W	P47062	111 aa		0.58	□□□□□ -2.32
UBP3	YER151C	UBC13	P52490	153 aa		0.58	□□□□□ -2.32
UBP3	YER151C	RNH202	Q05635	350 aa		0.58	□□□□□ -2.32
UBP3	YER151C	BTS1	Q12051	335 aa		0.58	□□□□□ -2.32
UBP3	YER151C	APC9	Q12107	265 aa		0.58	□□□□□ -2.32
UBP3	YER151C	YOR029W	Q12243	111 aa		0.58	□□□□□ -2.32
UBP3	YER151C	JID1	Q12350	301 aa		0.58	□□□□□ -2.32
UBP3	YER151C	PCL9	Q12477	304 aa		0.58	□□□□□ -2.32
UBP3	YER151C	PET494	P07390	489 aa	Predicted RBP	0.57	□□□□□ -2.32
UBP3	YER151C	TRX3	P25372	127 aa		0.57	□□□□□ -2.32
UBP3	YER151C	COX14	P39103	70 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YER076C	P40049	302 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YJL009W	P47078	108 aa		0.57	□□□□□ -2.32
UBP3	YER151C	GRX5	Q02784	150 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YDR210W	Q03482	75 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YCT1	Q12235	531 aa		0.57	□□□□□ -2.32
UBP3	YER151C	MBF1	O14467	151 aa	Known RBP	0.57	□□□□□ -2.32
UBP3	YER151C	ADK1	P07170	222 aa	Known RBP	0.57	□□□□□ -2.32
UBP3	YER151C	YCR016W	P25617	290 aa	Known RBP	0.57	□□□□□ -2.32
UBP3	YER151C	YBL071C	P38185	102 aa		0.57	□□□□□ -2.32
UBP3	YER151C	SHG1	P38337	142 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YEA4	P40004	342 aa		0.57	□□□□□ -2.32
UBP3	YER151C	EDC2	P40023	145 aa	Predicted RBP	0.57	□□□□□ -2.32
UBP3	YER151C	YMR141C	P40211	102 aa		0.57	□□□□□ -2.32
UBP3	YER151C	FAR7	P43592	221 aa		0.57	□□□□□ -2.32
UBP3	YER151C	ERJ5	P43613	295 aa	Predicted RBP	0.57	□□□□□ -2.32
UBP3	YER151C	GON7	P46984	123 aa		0.57	□□□□□ -2.32
UBP3	YER151C	MCM22	P47167	239 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YGL262W	P53054	175 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YGL159W	P53110	370 aa		0.57	□□□□□ -2.32
UBP3	YER151C	TOS8	P53147	276 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YGR164W	P53291	111 aa		0.57	□□□□□ -2.32
UBP3	YER151C	AAH1	P53909	347 aa		0.57	□□□□□ -2.32
UBP3	YER151C	RMI1	Q02685	241 aa		0.57	□□□□□ -2.32
UBP3	YER151C	DML1	Q03652	475 aa		0.57	□□□□□ -2.32
UBP3	YER151C	IRC23	Q08416	157 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YCL048W-A	Q2V2Q2	79 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YPR108W-A	Q3E7B3	70 aa		0.57	□□□□□ -2.32
UBP3	YER151C	YOR020W-A	Q3E824	90 aa		0.57	□□□□□ -2.32
UBP3	YER151C	PET20	Q99373	253 aa		0.57	□□□□□ -2.32
UBP3	YER151C	ENV10	Q99382	181 aa		0.57	□□□□□ -2.32
UBP3	YER151C	PIS1	P06197	220 aa	Known RBP	0.56	□□□□□ -2.32
UBP3	YER151C	MRS1	P07266	363 aa		0.56	□□□□□ -2.32
UBP3	YER151C	YJL197C-A	P0C5P0	93 aa		0.56	□□□□□ -2.32
UBP3	YER151C	SEC59	P20048	519 aa		0.56	□□□□□ -2.32
UBP3	YER151C	UBC8	P28263	218 aa		0.56	□□□□□ -2.32

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