RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeastyeast

Gene RRP1, Length 837 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP1YDR087C TDA4P47153 279 aa2.53□□□□□ -2
RRP1YDR087C MPA43P53583 542 aaPredicted RBP2.53□□□□□ -2
RRP1YDR087C RTC4P53850 401 aa2.53□□□□□ -2
RRP1YDR087C YMR315WQ04869 349 aaKnown RBP2.53□□□□□ -2
RRP1YDR087C NOC4Q06512 552 aaPredicted RBP2.53□□□□□ -2
RRP1YDR087C YLR031WQ07978 186 aa2.53□□□□□ -2
RRP1YDR087C MLP1Q02455 1875 aaKnown RBP2.53□□□□□ -2
RRP1YDR087C MYO1P08964 1928 aa2.52□□□□□ -2.01
RRP1YDR087C TAH1P25638 111 aaPredicted RBP2.52□□□□□ -2.01
RRP1YDR087C TVP23P38962 199 aa2.52□□□□□ -2.01
RRP1YDR087C FAS1P07149 2051 aaKnown RBP2.51□□□□□ -2.01
RRP1YDR087C YPL073CP40323 161 aa2.51□□□□□ -2.01
RRP1YDR087C RNH202Q05635 350 aa2.51□□□□□ -2.01
RRP1YDR087C IRC23Q08416 157 aa2.51□□□□□ -2.01
RRP1YDR087C YML100W-AQ8TGT0 57 aa2.51□□□□□ -2.01
RRP1YDR087C MOT1P32333 1867 aa2.51□□□□□ -2.01
RRP1YDR087C TRA1P38811 3744 aa2.51□□□□□ -2.01
RRP1YDR087C MSB2P32334 1306 aa2.5□□□□□ -2.01
RRP1YDR087C GRX8Q05926 109 aa2.5□□□□□ -2.01
RRP1YDR087C MTW1P39731 289 aa2.49□□□□□ -2.01
RRP1YDR087C NRK1P53915 240 aa2.49□□□□□ -2.01
RRP1YDR087C UBC7Q02159 165 aa2.49□□□□□ -2.01
RRP1YDR087C YNL146C-AQ3E7Z1 64 aa2.49□□□□□ -2.01
RRP1YDR087C TIR1P10863 254 aa2.48□□□□□ -2.01
RRP1YDR087C MGT1P26188 188 aa2.48□□□□□ -2.01
RRP1YDR087C YFL019CP43576 117 aa2.48□□□□□ -2.01
RRP1YDR087C GIM3P53900 129 aa2.48□□□□□ -2.01
RRP1YDR087C YLR036CQ07986 203 aa2.48□□□□□ -2.01
RRP1YDR087C MDM35O60200 86 aa2.47□□□□□ -2.01
RRP1YDR087C CAF4P36130 643 aa2.47□□□□□ -2.01
RRP1YDR087C YHL018WP38744 120 aaPredicted RBP2.47□□□□□ -2.01
RRP1YDR087C FLX1P40464 311 aa2.47□□□□□ -2.01
RRP1YDR087C YNL247WP53852 767 aaKnown RBP2.47□□□□□ -2.01
RRP1YDR087C PGA1P53896 198 aa2.47□□□□□ -2.01
RRP1YDR087C SNO1Q03144 224 aa2.47□□□□□ -2.01
RRP1YDR087C YPR174CQ06616 221 aaPredicted RBP2.47□□□□□ -2.01
RRP1YDR087C YKR041WP36134 250 aa2.46□□□□□ -2.02
RRP1YDR087C SHG1P38337 142 aa2.46□□□□□ -2.02
RRP1YDR087C YAE1P47118 141 aaPredicted RBP2.46□□□□□ -2.02
RRP1YDR087C DAD4P69851 72 aa2.46□□□□□ -2.02
RRP1YDR087C YHR007C-AQ07074 71 aa2.46□□□□□ -2.02
RRP1YDR087C YDL085C-AQ3E7B7 68 aaKnown RBP2.46□□□□□ -2.02
RRP1YDR087C DUR1,2P32528 1835 aaKnown RBP2.45□□□□□ -2.02
RRP1YDR087C TRX3P25372 127 aa2.45□□□□□ -2.02
RRP1YDR087C ATP7P30902 174 aa2.45□□□□□ -2.02
RRP1YDR087C RIO2P40160 425 aaKnown RBP2.45□□□□□ -2.02
RRP1YDR087C HOP2P53187 214 aa2.45□□□□□ -2.02
RRP1YDR087C YMR295CQ03559 197 aa2.45□□□□□ -2.02
RRP1YDR087C SHH3Q04487 196 aa2.45□□□□□ -2.02
RRP1YDR087C GRE1Q08969 168 aa2.45□□□□□ -2.02
RRP1YDR087C MEC1P38111 2368 aa2.44□□□□□ -2.02
RRP1YDR087C PAM17P36147 197 aa2.44□□□□□ -2.02
RRP1YDR087C YFH7P43591 353 aa2.44□□□□□ -2.02
RRP1YDR087C AQY2P0CD90 149 aa2.43□□□□□ -2.02
RRP1YDR087C AHC2P25649 128 aa2.43□□□□□ -2.02
RRP1YDR087C MOB1P40484 314 aa2.43□□□□□ -2.02
RRP1YDR087C YNL033WP53964 284 aa2.43□□□□□ -2.02
RRP1YDR087C VPS71Q03433 280 aa2.43□□□□□ -2.02
RRP1YDR087C AIM34Q03673 198 aa2.43□□□□□ -2.02
RRP1YDR087C PRP11Q07350 266 aaPredicted RBP2.43□□□□□ -2.02
RRP1YDR087C SPC25P40014 221 aa2.42□□□□□ -2.02
RRP1YDR087C GPI14P47088 403 aaKnown RBP2.42□□□□□ -2.02
RRP1YDR087C YMR253CQ04835 414 aa2.42□□□□□ -2.02
RRP1YDR087C ATG38Q05789 226 aaKnown RBP2.42□□□□□ -2.02
RRP1YDR087C BRX1Q08235 291 aaKnown RBP2.42□□□□□ -2.02
RRP1YDR087C FIT2Q08906 153 aa2.42□□□□□ -2.02
RRP1YDR087C LAA1P39526 2014 aa2.41□□□□□ -2.02
RRP1YDR087C COX8P04039 78 aa2.41□□□□□ -2.02
RRP1YDR087C GCY1P14065 312 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
RRP1YDR087C IDP1P21954 428 aaKnown RBP2.41□□□□□ -2.02
RRP1YDR087C CLG1P35190 452 aa2.41□□□□□ -2.02
RRP1YDR087C TMA22P47089 198 aaPredicted RBP2.41□□□□□ -2.02
RRP1YDR087C THG1P53215 237 aaKnown RBP2.41□□□□□ -2.02
RRP1YDR087C FYV12Q08559 129 aa2.41□□□□□ -2.02
RRP1YDR087C YPR013CQ12145 317 aa2.41□□□□□ -2.02
RRP1YDR087C HYR1P40581 163 aaKnown RBP2.4□□□□□ -2.03
RRP1YDR087C CUP9P41817 306 aa2.4□□□□□ -2.03
RRP1YDR087C CWC27Q02770 301 aa2.4□□□□□ -2.03
RRP1YDR087C MPD1Q12404 318 aaKnown RBP2.4□□□□□ -2.03
RRP1YDR087C YLR412C-AQ3E742 68 aa2.4□□□□□ -2.03
RRP1YDR087C YLR422WQ06409 1932 aa2.4□□□□□ -2.03
RRP1YDR087C ECM4P36156 370 aa2.39□□□□□ -2.03
RRP1YDR087C YHL042WP38729 150 aa2.39□□□□□ -2.03
RRP1YDR087C NSG1P38837 291 aa2.39□□□□□ -2.03
RRP1YDR087C POG1P40473 351 aa2.39□□□□□ -2.03
RRP1YDR087C YFL065CP43539 102 aa2.39□□□□□ -2.03
RRP1YDR087C FMP32P43557 207 aa2.39□□□□□ -2.03
RRP1YDR087C DIG2Q03373 323 aaKnown RBP2.39□□□□□ -2.03
RRP1YDR087C RCE1Q03530 315 aa2.39□□□□□ -2.03
RRP1YDR087C YMR252CQ04814 134 aa2.39□□□□□ -2.03
RRP1YDR087C YMR321CQ04898 105 aa2.39□□□□□ -2.03
RRP1YDR087C YET3Q07451 203 aa2.39□□□□□ -2.03
RRP1YDR087C YOR342CQ12182 319 aa2.39□□□□□ -2.03
RRP1YDR087C SAC3P46674 1301 aa2.39□□□□□ -2.03
RRP1YDR087C NSP1P14907 823 aaKnown RBP2.38□□□□□ -2.03
RRP1YDR087C HPA3P39979 161 aa2.38□□□□□ -2.03
RRP1YDR087C SEC16P48415 2195 aaKnown RBP2.38□□□□□ -2.03
RRP1YDR087C DGK1Q12382 290 aa2.38□□□□□ -2.03
RRP1YDR087C YPR014CQ6B0W2 109 aa2.38□□□□□ -2.03
RRP1YDR087C RIF1P29539 1916 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms