RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W NMA1Q06178 401 aaKnown RBP1.75□□□□□ -2.13
VPS41YDR080W MSH5Q12175 901 aa1.75□□□□□ -2.13
VPS41YDR080W YPS3Q12303 508 aa1.75□□□□□ -2.13
VPS41YDR080W MED11Q99278 115 aa1.75□□□□□ -2.13
VPS41YDR080W YLL053CP0CD98 152 aa1.75□□□□□ -2.13
VPS41YDR080W YAR068WP39564 161 aa1.75□□□□□ -2.13
VPS41YDR080W YJR015WP47090 510 aa1.75□□□□□ -2.13
VPS41YDR080W VMA10P48836 114 aaKnown RBP1.75□□□□□ -2.13
VPS41YDR080W DOC1P53068 250 aa1.75□□□□□ -2.13
VPS41YDR080W LOA1Q06508 300 aa1.75□□□□□ -2.13
VPS41YDR080W YLR099W-AQ3E798 87 aa1.75□□□□□ -2.13
VPS41YDR080W SEN2P16658 377 aa1.74□□□□□ -2.13
VPS41YDR080W AGA2P32781 87 aa1.74□□□□□ -2.13
VPS41YDR080W GPI2P46961 280 aa1.74□□□□□ -2.13
VPS41YDR080W SPC1P46965 94 aa1.74□□□□□ -2.13
VPS41YDR080W YEL009C-AA0A023PZF2 135 aa1.74□□□□□ -2.13
VPS41YDR080W GIM3P53900 129 aa1.74□□□□□ -2.13
VPS41YDR080W GPI15P53961 229 aa1.74□□□□□ -2.13
VPS41YDR080W IRC23Q08416 157 aa1.74□□□□□ -2.13
VPS41YDR080W HUG1Q6Q5K6 68 aa1.74□□□□□ -2.13
VPS41YDR080W HIS3P06633 220 aa1.74□□□□□ -2.13
VPS41YDR080W FMT1P32785 401 aa1.74□□□□□ -2.13
VPS41YDR080W MRPL27P36526 146 aaPredicted RBP1.74□□□□□ -2.13
VPS41YDR080W ARP3P47117 449 aaKnown RBP1.74□□□□□ -2.13
VPS41YDR080W YFH1Q07540 174 aa1.74□□□□□ -2.13
VPS41YDR080W LCL2Q08045 131 aa1.74□□□□□ -2.13
VPS41YDR080W CCW12Q12127 133 aa1.74□□□□□ -2.13
VPS41YDR080W ODC2Q99297 307 aa1.74□□□□□ -2.13
VPS41YDR080W ANB1P19211 157 aa1.73□□□□□ -2.13
VPS41YDR080W TRR1P29509 319 aaKnown RBP1.73□□□□□ -2.13
VPS41YDR080W EGD2P38879 174 aaKnown RBP1.73□□□□□ -2.13
VPS41YDR080W BDH1P39714 382 aa1.73□□□□□ -2.13
VPS41YDR080W CAT5P41735 233 aa1.73□□□□□ -2.13
VPS41YDR080W SDH7Q04401 133 aa1.73□□□□□ -2.13
VPS41YDR080W SCP1Q08873 200 aa1.73□□□□□ -2.13
VPS41YDR080W YGR240C-AQ3E786 66 aa1.73□□□□□ -2.13
VPS41YDR080W RPL24AP04449 155 aaKnown RBP1.73□□□□□ -2.13
VPS41YDR080W IRC22P40006 225 aa1.73□□□□□ -2.13
VPS41YDR080W DFG10P40526 253 aa1.73□□□□□ -2.13
VPS41YDR080W OTU1P43558 301 aa1.73□□□□□ -2.13
VPS41YDR080W YGR018CP53211 109 aa1.73□□□□□ -2.13
VPS41YDR080W BUD25P85052 153 aa1.73□□□□□ -2.13
VPS41YDR080W EST3Q03096 181 aa1.73□□□□□ -2.13
VPS41YDR080W THI74Q04083 370 aa1.73□□□□□ -2.13
VPS41YDR080W DCS1Q06151 350 aa1.73□□□□□ -2.13
VPS41YDR080W GPN3Q06543 272 aa1.73□□□□□ -2.13
VPS41YDR080W SYM1Q06563 197 aa1.73□□□□□ -2.13
VPS41YDR080W PAM18Q07914 168 aa1.73□□□□□ -2.13
VPS41YDR080W DFM1Q12743 341 aaKnown RBP1.73□□□□□ -2.13
VPS41YDR080W ZRC1P20107 442 aa1.72□□□□□ -2.13
VPS41YDR080W YCR025CP25352 136 aa1.72□□□□□ -2.13
VPS41YDR080W LSM12P38828 187 aaKnown RBP1.72□□□□□ -2.13
VPS41YDR080W MCM22P47167 239 aa1.72□□□□□ -2.13
VPS41YDR080W FMP41P53889 259 aaKnown RBP1.72□□□□□ -2.13
VPS41YDR080W YJL197C-AP0C5P0 93 aa1.72□□□□□ -2.13
VPS41YDR080W HOM6P31116 359 aaKnown RBP1.72□□□□□ -2.13
VPS41YDR080W MST27P53176 234 aa1.72□□□□□ -2.13
VPS41YDR080W GRX5Q02784 150 aa1.72□□□□□ -2.13
VPS41YDR080W COA4Q05809 96 aa1.72□□□□□ -2.13
VPS41YDR080W FRQ1Q06389 190 aa1.72□□□□□ -2.13
VPS41YDR080W YOR385WQ08909 290 aa1.72□□□□□ -2.13
VPS41YDR080W PET20Q99373 253 aa1.72□□□□□ -2.13
VPS41YDR080W NSA2P40078 261 aaKnown RBP1.71□□□□□ -2.14
VPS41YDR080W BNS1P50084 137 aa1.71□□□□□ -2.14
VPS41YDR080W VHT1P53241 593 aa1.71□□□□□ -2.14
VPS41YDR080W YLR042CQ07990 161 aa1.71□□□□□ -2.14
VPS41YDR080W TIR4Q12218 487 aaPredicted RBP1.71□□□□□ -2.14
VPS41YDR080W SCM3Q12334 223 aa1.71□□□□□ -2.14
VPS41YDR080W YHR213WP0CI67 198 aa1.71□□□□□ -2.14
VPS41YDR080W CAP2P13517 287 aa1.71□□□□□ -2.14
VPS41YDR080W CSH1P38287 376 aa1.71□□□□□ -2.14
VPS41YDR080W PAM16P42949 149 aa1.71□□□□□ -2.14
VPS41YDR080W YML018CQ03730 393 aa1.71□□□□□ -2.14
VPS41YDR080W YOR011W-AQ3E807 68 aa1.71□□□□□ -2.14
VPS41YDR080W ERV15P38312 142 aa1.71□□□□□ -2.14
VPS41YDR080W GOS1P38736 223 aa1.71□□□□□ -2.14
VPS41YDR080W YCH1P42937 148 aa1.71□□□□□ -2.14
VPS41YDR080W IMP2P46972 177 aa1.71□□□□□ -2.14
VPS41YDR080W YGR050CP53231 118 aa1.71□□□□□ -2.14
VPS41YDR080W YPR145C-AQ2V2P0 78 aa1.71□□□□□ -2.14
VPS41YDR080W MRP17P28778 131 aa1.7□□□□□ -2.14
VPS41YDR080W SPI1P40092 148 aa1.7□□□□□ -2.14
VPS41YDR080W VHS2P40463 436 aa1.7□□□□□ -2.14
VPS41YDR080W HST4P53688 370 aa1.7□□□□□ -2.14
VPS41YDR080W YPR195CQ06594 109 aa1.7□□□□□ -2.14
VPS41YDR080W ATG41Q12048 136 aa1.7□□□□□ -2.14
VPS41YDR080W EMP24P32803 203 aaKnown RBP1.7□□□□□ -2.14
VPS41YDR080W CWC23P52868 283 aaPredicted RBP1.7□□□□□ -2.14
VPS41YDR080W YGR017WP53210 297 aa1.7□□□□□ -2.14
VPS41YDR080W KEI1Q06346 221 aa1.7□□□□□ -2.14
VPS41YDR080W PAA1Q12447 191 aaKnown RBP1.7□□□□□ -2.14
VPS41YDR080W YPR010C-AA5Z2X5 72 aa1.69□□□□□ -2.14
VPS41YDR080W RTC6O14464 93 aa1.69□□□□□ -2.14
VPS41YDR080W QCR2P07257 368 aa1.69□□□□□ -2.14
VPS41YDR080W YCR001WP25347 104 aa1.69□□□□□ -2.14
VPS41YDR080W GLE2P40066 365 aa1.69□□□□□ -2.14
VPS41YDR080W YER135CP40082 130 aa1.69□□□□□ -2.14
VPS41YDR080W UBC7Q02159 165 aa1.69□□□□□ -2.14
VPS41YDR080W PIS1P06197 220 aaKnown RBP1.69□□□□□ -2.14
VPS41YDR080W MBA1P38300 278 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms