RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	SOD1	P00445	154 aa	Known RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	SPS100	P13130	326 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	IES6	P32617	166 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	RAD23	P32628	398 aa	Known RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	YKL187C	P34231	750 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	MTR2	P34232	184 aa	Known RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	MRPL28	P36527	147 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	AVT5	P38176	459 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	GPI18	P38211	433 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	LSM8	P47093	109 aa	Known RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	APS2	Q00381	147 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	YPL108W	Q02872	168 aa	Predicted RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	PML1	Q07930	204 aa	Predicted RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	YPR071W	Q12346	211 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	FRS1	P15624	595 aa	Known RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	RPS2	P25443	254 aa	Known RBP	5.79	□□□□□ -1.48
CDC7	YDL017W	SRP21	P32342	167 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	SSS1	P35179	80 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	YKR045C	P36138	183 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	CDS1	P38221	457 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	CSH1	P38287	376 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	BDH1	P39714	382 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	LST8	P41318	303 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	CGR1	P53188	120 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	YGR018C	P53211	109 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	STD1	Q02794	444 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	NAT3	Q06504	195 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	ARR2	Q06597	130 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	MCH1	Q07376	486 aa		5.79	□□□□□ -1.48
CDC7	YDL017W	TCA17	P32613	152 aa		5.78	□□□□□ -1.48
CDC7	YDL017W	YBL071C	P38185	102 aa		5.78	□□□□□ -1.48
CDC7	YDL017W	YIL163C	P40448	117 aa		5.78	□□□□□ -1.48
CDC7	YDL017W	CYT2	Q00873	224 aa		5.78	□□□□□ -1.48
CDC7	YDL017W	MED7	Q08278	222 aa		5.78	□□□□□ -1.48
CDC7	YDL017W	DCN1	Q12395	269 aa		5.78	□□□□□ -1.48
CDC7	YDL017W	YCR022C	P25620	114 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	ICS2	P38284	255 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	SRP14	P38985	146 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	YJL213W	P40896	331 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	YNL234W	P53857	426 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	CUE4	Q04201	117 aa	Predicted RBP	5.77	□□□□□ -1.49
CDC7	YDL017W	IRC25	Q07951	179 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	MET32	Q12041	191 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	SMT3	Q12306	101 aa	Known RBP	5.77	□□□□□ -1.49
CDC7	YDL017W	ATO3	Q12359	275 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	GEP5	Q12393	293 aa		5.77	□□□□□ -1.49
CDC7	YDL017W	PAA1	Q12447	191 aa	Known RBP	5.77	□□□□□ -1.49
CDC7	YDL017W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.76	□□□□□ -1.49	not detected
CDC7	YDL017W	HEM13	P11353	328 aa	Known RBP	5.76	□□□□□ -1.49
CDC7	YDL017W	YGL010W	P25338	174 aa		5.76	□□□□□ -1.49
CDC7	YDL017W	PHD1	P36093	366 aa		5.76	□□□□□ -1.49
CDC7	YDL017W	IRC22	P40006	225 aa		5.76	□□□□□ -1.49
CDC7	YDL017W	PIC2	P40035	300 aa		5.76	□□□□□ -1.49
CDC7	YDL017W	SBH2	P52871	88 aa		5.76	□□□□□ -1.49
CDC7	YDL017W	CPD1	P53314	239 aa		5.76	□□□□□ -1.49
CDC7	YDL017W	TRA1	P38811	3744 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	ADE8	P04161	214 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	HSP12	P22943	109 aa	Known RBP	5.75	□□□□□ -1.49
CDC7	YDL017W	SUA7	P29055	345 aa	Predicted RBP	5.75	□□□□□ -1.49
CDC7	YDL017W	DOG2	P38773	246 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	DOG1	P38774	246 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	YHR173C	P38864	112 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	YGR149W	P48236	432 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	YGR045C	P53229	120 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	NDE2	Q07500	545 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	FIT2	Q08906	153 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	WTM2	Q12206	467 aa		5.75	□□□□□ -1.49
CDC7	YDL017W	PRP8	P33334	2413 aa	Known RBP	5.75	□□□□□ -1.49
CDC7	YDL017W	PRE9	P23638	258 aa	Known RBP	5.74	□□□□□ -1.49
CDC7	YDL017W	NNK1	P36003	928 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	GAT2	P40209	560 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	YJL163C	P46996	555 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	SUT1	P53032	299 aa	Known RBP	5.74	□□□□□ -1.49
CDC7	YDL017W	YIP1	P53039	248 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	SEN15	Q04675	128 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	ADH6	Q04894	360 aa	Known RBP	5.74	□□□□□ -1.49
CDC7	YDL017W	YOR105W	Q08504	108 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	ILV5	P06168	395 aa	Known RBP	5.74	□□□□□ -1.49
CDC7	YDL017W	DAD2	P36162	133 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	SFT2	P38166	215 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	YBR090C	P38253	122 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	NCA3	P46955	337 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	YGR151C	P53287	111 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	YNR071C	P53757	342 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	OCA2	P53949	197 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	RKI1	Q12189	258 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	TMA17	Q12513	150 aa		5.74	□□□□□ -1.49
CDC7	YDL017W	POR1	P04840	283 aa	Known RBP	5.73	□□□□□ -1.49
CDC7	YDL017W	YKL075C	P36083	450 aa		5.73	□□□□□ -1.49
CDC7	YDL017W	LSM4	P40070	187 aa	Known RBP	5.73	□□□□□ -1.49
CDC7	YDL017W	MRX11	Q03079	207 aa		5.73	□□□□□ -1.49
CDC7	YDL017W	RAV2	Q03956	351 aa		5.73	□□□□□ -1.49
CDC7	YDL017W	TMC1	Q08422	150 aa	Predicted RBP	5.73	□□□□□ -1.49
CDC7	YDL017W	YOR352W	Q08816	343 aa		5.73	□□□□□ -1.49
CDC7	YDL017W	LSO2	Q3E772	92 aa	Known RBP	5.73	□□□□□ -1.49
CDC7	YDL017W	YNR034W-A	Q3E841	98 aa		5.73	□□□□□ -1.49
CDC7	YDL017W	YLR302C	O13544	120 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	QRI5	P32344	111 aa		5.72	□□□□□ -1.49
CDC7	YDL017W	LSM2	P38203	95 aa	Known RBP	5.72	□□□□□ -1.49
CDC7	YDL017W	GZF3	P42944	551 aa	Known RBP	5.72	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms