RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B CDC39P25655 2108 aaKnown RBP-0.94□□□□□ -2.56
HTL1YCR020W-B SPT14P32363 452 aa-0.95□□□□□ -2.56
HTL1YCR020W-B HSP150P32478 413 aa-0.95□□□□□ -2.56
HTL1YCR020W-B FYV4P38783 130 aaPredicted RBP-0.95□□□□□ -2.56
HTL1YCR020W-B YJL009WP47078 108 aa-0.95□□□□□ -2.56
HTL1YCR020W-B CMC4Q3E7A9 73 aa-0.95□□□□□ -2.56
HTL1YCR020W-B BNI1P41832 1953 aa-0.96□□□□□ -2.56
HTL1YCR020W-B SEC14P24280 304 aaKnown RBP-0.96□□□□□ -2.56
HTL1YCR020W-B PAC10P48363 199 aa-0.96□□□□□ -2.56
HTL1YCR020W-B SOL1P50278 321 aa-0.96□□□□□ -2.56
HTL1YCR020W-B AIM34Q03673 198 aa-0.96□□□□□ -2.56
HTL1YCR020W-B ARO80Q04052 950 aa-0.96□□□□□ -2.56
HTL1YCR020W-B YPR127WQ06494 345 aa-0.96□□□□□ -2.56
HTL1YCR020W-B YOL024WQ08172 172 aa-0.96□□□□□ -2.56
HTL1YCR020W-B HSL1P34244 1518 aa-0.97□□□□□ -2.56
HTL1YCR020W-B RAD6P06104 172 aa-0.97□□□□□ -2.56
HTL1YCR020W-B HYP2P23301 157 aaKnown RBP-0.97□□□□□ -2.56
HTL1YCR020W-B MSS2P40990 351 aa-0.97□□□□□ -2.56
HTL1YCR020W-B FMN1Q03778 218 aa-0.97□□□□□ -2.56
HTL1YCR020W-B RNH1Q04740 348 aa-0.97□□□□□ -2.56
HTL1YCR020W-B YMR321CQ04898 105 aa-0.97□□□□□ -2.56
HTL1YCR020W-B YOR214CQ12282 236 aa-0.97□□□□□ -2.56
HTL1YCR020W-B SPS2P08459 502 aa-0.98□□□□□ -2.57
HTL1YCR020W-B CBF1P17106 351 aa-0.98□□□□□ -2.57
HTL1YCR020W-B TRX3P25372 127 aa-0.98□□□□□ -2.57
HTL1YCR020W-B ATG8P38182 117 aaRIP-Chip data-0.98□□□□□ -2.57not detected
HTL1YCR020W-B CSH1P38287 376 aa-0.98□□□□□ -2.57
HTL1YCR020W-B YEL073CP39974 107 aa-0.98□□□□□ -2.57
HTL1YCR020W-B GLC8P41818 229 aa-0.99□□□□□ -2.57
HTL1YCR020W-B YDL241WQ07738 123 aa-0.99□□□□□ -2.57
HTL1YCR020W-B MPD1Q12404 318 aaKnown RBP-0.99□□□□□ -2.57
HTL1YCR020W-B ARG80P07249 177 aa-1□□□□□ -2.57
HTL1YCR020W-B ECM31P38122 312 aa-1□□□□□ -2.57
HTL1YCR020W-B MVB12P42939 101 aa-1□□□□□ -2.57
HTL1YCR020W-B TIM13P53299 105 aa-1□□□□□ -2.57
HTL1YCR020W-B YCL012CQ8J0M4 134 aa-1□□□□□ -2.57
HTL1YCR020W-B TAH1P25638 111 aaPredicted RBP-1.01□□□□□ -2.57
HTL1YCR020W-B YNL200CP40165 246 aaKnown RBP-1.01□□□□□ -2.57
HTL1YCR020W-B GLR1P41921 483 aaKnown RBP-1.01□□□□□ -2.57
HTL1YCR020W-B UIP4Q08926 304 aa-1.01□□□□□ -2.57
HTL1YCR020W-B GIS3Q12418 502 aa-1.01□□□□□ -2.57
HTL1YCR020W-B HUG1Q6Q5K6 68 aa-1.01□□□□□ -2.57
HTL1YCR020W-B TRM3Q07527 1436 aa-1.01□□□□□ -2.57
HTL1YCR020W-B GSC2P40989 1895 aa-1.01□□□□□ -2.57
HTL1YCR020W-B RPL33AP05744 107 aaKnown RBP-1.02□□□□□ -2.57
HTL1YCR020W-B YEL028WP39989 153 aa-1.02□□□□□ -2.57
HTL1YCR020W-B HOP2P53187 214 aa-1.02□□□□□ -2.57
HTL1YCR020W-B NQM1P53228 333 aaPredicted RBP-1.02□□□□□ -2.57
HTL1YCR020W-B YDL085C-AQ3E7B7 68 aaKnown RBP-1.02□□□□□ -2.57
HTL1YCR020W-B COA6Q3E846 104 aa-1.02□□□□□ -2.57
HTL1YCR020W-B DDR48P18899 430 aaKnown RBP-1.03□□□□□ -2.57
HTL1YCR020W-B IRC21Q04772 201 aa-1.03□□□□□ -2.57
HTL1YCR020W-B SHH4Q06236 168 aa-1.03□□□□□ -2.57
HTL1YCR020W-B RIB3Q99258 208 aa-1.03□□□□□ -2.57
HTL1YCR020W-B MATALPHA2P0CY08 210 aa-1.04□□□□□ -2.58
HTL1YCR020W-B HMLALPHA2P0CY09 210 aa-1.04□□□□□ -2.58
HTL1YCR020W-B AHC2P25649 128 aa-1.04□□□□□ -2.58
HTL1YCR020W-B YKL102CP34249 101 aa-1.04□□□□□ -2.58
HTL1YCR020W-B CAF4P36130 643 aa-1.04□□□□□ -2.58
HTL1YCR020W-B IPT1P38954 527 aa-1.04□□□□□ -2.58
HTL1YCR020W-B MRPS17Q03246 237 aaPredicted RBP-1.04□□□□□ -2.58
HTL1YCR020W-B LIP1Q03579 150 aa-1.04□□□□□ -2.58
HTL1YCR020W-B FIT3Q08907 204 aa-1.04□□□□□ -2.58
HTL1YCR020W-B INO4P13902 151 aa-1.05□□□□□ -2.58
HTL1YCR020W-B SYM1Q06563 197 aa-1.05□□□□□ -2.58
HTL1YCR020W-B RAD9P14737 1309 aa-1.06□□□□□ -2.58
HTL1YCR020W-B PHO13P19881 312 aa-1.06□□□□□ -2.58
HTL1YCR020W-B TTI2P47168 421 aa-1.06□□□□□ -2.58
HTL1YCR020W-B PGA2P53903 129 aa-1.06□□□□□ -2.58
HTL1YCR020W-B NOC4Q06512 552 aaPredicted RBP-1.06□□□□□ -2.58
HTL1YCR020W-B BRX1Q08235 291 aaKnown RBP-1.06□□□□□ -2.58
HTL1YCR020W-B ADE6P38972 1358 aaKnown RBP-1.07□□□□□ -2.58
HTL1YCR020W-B QCR7P00128 127 aa-1.07□□□□□ -2.58
HTL1YCR020W-B FMP32P43557 207 aa-1.07□□□□□ -2.58
HTL1YCR020W-B NMA1Q06178 401 aaKnown RBP-1.07□□□□□ -2.58
HTL1YCR020W-B FAS2P19097 1887 aaKnown RBP-1.08□□□□□ -2.58
HTL1YCR020W-B GRX8Q05926 109 aa-1.09□□□□□ -2.58
HTL1YCR020W-B ATG10Q07879 167 aa-1.09□□□□□ -2.58
HTL1YCR020W-B SRL3P36167 246 aa-1.1□□□□□ -2.59
HTL1YCR020W-B YPT31P38555 223 aaKnown RBP-1.1□□□□□ -2.59
HTL1YCR020W-B DIE2P50076 525 aa-1.11□□□□□ -2.59
HTL1YCR020W-B YPR114WQ06107 315 aa-1.11□□□□□ -2.59
HTL1YCR020W-B MYO1P08964 1928 aa-1.12□□□□□ -2.59
HTL1YCR020W-B YGL041W-AP0C5N3 154 aa-1.12□□□□□ -2.59
HTL1YCR020W-B PEX34P25584 144 aa-1.12□□□□□ -2.59
HTL1YCR020W-B YGL014C-AP0C5N1 53 aa-1.13□□□□□ -2.59
HTL1YCR020W-B YMR122CQ03879 124 aa-1.13□□□□□ -2.59
HTL1YCR020W-B NUF2P33895 451 aa-1.14□□□□□ -2.59
HTL1YCR020W-B GPI11Q06636 219 aa-1.14□□□□□ -2.59
HTL1YCR020W-B SPA2P23201 1466 aaKnown RBP-1.15□□□□□ -2.59
HTL1YCR020W-B IPI1P38803 334 aaPredicted RBP-1.15□□□□□ -2.59
HTL1YCR020W-B NVJ1P38881 321 aa-1.15□□□□□ -2.59
HTL1YCR020W-B FIP1P45976 327 aa-1.15□□□□□ -2.59
HTL1YCR020W-B YNR064CP53750 290 aa-1.15□□□□□ -2.59
HTL1YCR020W-B EST3Q03096 181 aa-1.15□□□□□ -2.59
HTL1YCR020W-B AUA1P32450 94 aa-1.16□□□□□ -2.6
HTL1YCR020W-B SRP102P36057 244 aaPredicted RBP-1.16□□□□□ -2.6
HTL1YCR020W-B YKR041WP36134 250 aa-1.16□□□□□ -2.6
HTL1YCR020W-B XPT1P47165 209 aa-1.16□□□□□ -2.6
HTL1YCR020W-B RCF2P53721 224 aa-1.16□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms