RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C PET18P25362 215 aa2.45□□□□□ -2.02
RIF1YBR275C BUB2P26448 306 aaPredicted RBP2.45□□□□□ -2.02
RIF1YBR275C RPS1AP33442 255 aaKnown RBP2.45□□□□□ -2.02
RIF1YBR275C POR2P40478 281 aa2.45□□□□□ -2.02
RIF1YBR275C NFI1Q12216 726 aa2.45□□□□□ -2.02
RIF1YBR275C ATP14Q12349 124 aa2.45□□□□□ -2.02
RIF1YBR275C SNU23Q12368 194 aaPredicted RBP2.45□□□□□ -2.02
RIF1YBR275C SWM1Q12379 170 aa2.45□□□□□ -2.02
RIF1YBR275C RIB7P33312 244 aa2.44□□□□□ -2.02
RIF1YBR275C FRM2P37261 193 aa2.44□□□□□ -2.02
RIF1YBR275C UBC11P52492 156 aa2.44□□□□□ -2.02
RIF1YBR275C YDR366CP87287 132 aa2.44□□□□□ -2.02
RIF1YBR275C DDI2P0CH63 225 aa2.44□□□□□ -2.02
RIF1YBR275C DDI3P0CH64 225 aa2.44□□□□□ -2.02
RIF1YBR275C MRPL31P14063 131 aaPredicted RBP2.44□□□□□ -2.02
RIF1YBR275C TAX4P47030 604 aa2.44□□□□□ -2.02
RIF1YBR275C FSF1Q12029 327 aaKnown RBP2.44□□□□□ -2.02
RIF1YBR275C FUN14P18411 198 aa2.44□□□□□ -2.02
RIF1YBR275C SPT14P32363 452 aa2.44□□□□□ -2.02
RIF1YBR275C NNK1P36003 928 aa2.44□□□□□ -2.02
RIF1YBR275C YHR097CP38809 366 aaKnown RBP2.44□□□□□ -2.02
RIF1YBR275C YIR035CP40579 254 aa2.44□□□□□ -2.02
RIF1YBR275C YCH1P42937 148 aa2.44□□□□□ -2.02
RIF1YBR275C YMR166CQ03829 368 aa2.44□□□□□ -2.02
RIF1YBR275C FSH2Q05015 223 aa2.44□□□□□ -2.02
RIF1YBR275C YDL241WQ07738 123 aa2.44□□□□□ -2.02
RIF1YBR275C YKL068W-AQ3E826 78 aa2.44□□□□□ -2.02
RIF1YBR275C YLR236CA0A023PZG4 107 aa2.44□□□□□ -2.02
RIF1YBR275C RPL39P04650 51 aa2.44□□□□□ -2.02
RIF1YBR275C MRP17P28778 131 aa2.44□□□□□ -2.02
RIF1YBR275C SCW10Q04951 389 aa2.44□□□□□ -2.02
RIF1YBR275C RPL27AP0C2H6 136 aaKnown RBP2.44□□□□□ -2.02
RIF1YBR275C YKL070WP36087 169 aa2.44□□□□□ -2.02
RIF1YBR275C PAU7P39545 55 aa2.44□□□□□ -2.02
RIF1YBR275C OXA1P39952 402 aa2.44□□□□□ -2.02
RIF1YBR275C SMB1P40018 196 aaKnown RBP2.44□□□□□ -2.02
RIF1YBR275C PAU5P43575 122 aa2.44□□□□□ -2.02
RIF1YBR275C HNT2P49775 206 aa2.44□□□□□ -2.02
RIF1YBR275C YLR179CQ06252 201 aaKnown RBP2.44□□□□□ -2.02
RIF1YBR275C BUD32P53323 261 aa2.43□□□□□ -2.02
RIF1YBR275C YML054C-AQ3E809 52 aa2.43□□□□□ -2.02
RIF1YBR275C VPS63O13549 108 aa2.43□□□□□ -2.02
RIF1YBR275C TRP1P00912 224 aa2.43□□□□□ -2.02
RIF1YBR275C TRX3P25372 127 aa2.43□□□□□ -2.02
RIF1YBR275C YER085CP40058 173 aa2.43□□□□□ -2.02
RIF1YBR275C CCS1P40202 249 aaKnown RBP2.43□□□□□ -2.02
RIF1YBR275C SED1Q01589 338 aa2.43□□□□□ -2.02
RIF1YBR275C INP1Q03694 420 aa2.43□□□□□ -2.02
RIF1YBR275C MRPS8Q03799 155 aa2.43□□□□□ -2.02
RIF1YBR275C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
RIF1YBR275C NCE102Q12207 173 aaRIP-Chip data2.43□□□□□ -2.02not detected
RIF1YBR275C SSS1P35179 80 aa2.43□□□□□ -2.02
RIF1YBR275C DSK2P48510 373 aa2.43□□□□□ -2.02
RIF1YBR275C PAU23Q07987 124 aa2.43□□□□□ -2.02
RIF1YBR275C TIM22Q12328 207 aa2.43□□□□□ -2.02
RIF1YBR275C YPR096CO13587 100 aa2.42□□□□□ -2.02
RIF1YBR275C TFS1P14306 219 aa2.42□□□□□ -2.02
RIF1YBR275C BUD23P25627 275 aaPredicted RBP2.42□□□□□ -2.02
RIF1YBR275C SKG1P36169 355 aa2.42□□□□□ -2.02
RIF1YBR275C NSE4P43124 402 aa2.42□□□□□ -2.02
RIF1YBR275C TAO3P40468 2376 aa2.42□□□□□ -2.02
RIF1YBR275C ATP6P00854 259 aa2.42□□□□□ -2.02
RIF1YBR275C RPS1BP23248 255 aaKnown RBP2.42□□□□□ -2.02
RIF1YBR275C FMP46P36141 133 aaKnown RBP2.42□□□□□ -2.02
RIF1YBR275C COX12Q01519 83 aa2.42□□□□□ -2.02
RIF1YBR275C MRX11Q03079 207 aa2.42□□□□□ -2.02
RIF1YBR275C PIR3Q03180 325 aa2.42□□□□□ -2.02
RIF1YBR275C AIM36Q03798 255 aa2.42□□□□□ -2.02
RIF1YBR275C SEC11P15367 167 aa2.42□□□□□ -2.02
RIF1YBR275C CPT1P17898 393 aa2.42□□□□□ -2.02
RIF1YBR275C ERV1P27882 189 aa2.42□□□□□ -2.02
RIF1YBR275C AST1P35183 429 aa2.42□□□□□ -2.02
RIF1YBR275C YIR020CP40575 100 aa2.42□□□□□ -2.02
RIF1YBR275C NCE101Q02820 53 aa2.42□□□□□ -2.02
RIF1YBR275C YPL247CQ12523 523 aa2.42□□□□□ -2.02
RIF1YBR275C UBI4P0CG63 381 aaKnown RBP2.42□□□□□ -2.02
RIF1YBR275C YMR317WQ04893 1140 aa2.42□□□□□ -2.02
RIF1YBR275C AYT1Q12226 474 aa2.42□□□□□ -2.02
RIF1YBR275C SYS1P41544 203 aa2.42□□□□□ -2.02
RIF1YBR275C YCL001W-AP87012 153 aa2.42□□□□□ -2.02
RIF1YBR275C MAK3Q03503 176 aa2.42□□□□□ -2.02
RIF1YBR275C UTP15Q04305 513 aaKnown RBP2.42□□□□□ -2.02
RIF1YBR275C PST1Q12355 444 aa2.42□□□□□ -2.02
RIF1YBR275C STF2P16965 84 aa2.41□□□□□ -2.02
RIF1YBR275C YCR007CP25354 239 aa2.41□□□□□ -2.02
RIF1YBR275C RRT13P40042 185 aa2.41□□□□□ -2.02
RIF1YBR275C PEX27Q08580 376 aa2.41□□□□□ -2.02
RIF1YBR275C MRPL23Q12487 163 aaPredicted RBP2.41□□□□□ -2.02
RIF1YBR275C YCR023CP25351 611 aa2.41□□□□□ -2.02
RIF1YBR275C YUH1P35127 236 aa2.41□□□□□ -2.02
RIF1YBR275C YHL042WP38729 150 aa2.41□□□□□ -2.02
RIF1YBR275C HPA3P39979 161 aa2.41□□□□□ -2.02
RIF1YBR275C RPL31AP0C2H8 113 aaKnown RBP2.41□□□□□ -2.02
RIF1YBR275C MRPL16P38064 232 aa2.41□□□□□ -2.02
RIF1YBR275C PET100P38958 111 aa2.41□□□□□ -2.02
RIF1YBR275C RPA43P46669 326 aa2.41□□□□□ -2.02
RIF1YBR275C PIR5P46999 287 aa2.41□□□□□ -2.02
RIF1YBR275C PDR17P53844 350 aa2.41□□□□□ -2.02
RIF1YBR275C TDA7P53882 636 aaPredicted RBP2.41□□□□□ -2.02
RIF1YBR275C RPL22BP56628 122 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms