RNA–Protein interactions for RNA: YBR215W

HPC2, Transcript of Subunit of the HIR complex, yeastyeast

Gene HPC2, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HPC2YBR215W LYS5P50113 272 aa4.01□□□□□ -1.77
HPC2YBR215W YGL193CP53097 103 aa4.01□□□□□ -1.77
HPC2YBR215W RSM10Q03201 203 aa4.01□□□□□ -1.77
HPC2YBR215W USV1Q12132 391 aa4.01□□□□□ -1.77
HPC2YBR215W YFR032C-BQ8TGU2 87 aa4.01□□□□□ -1.77
HPC2YBR215W CYC1P00044 109 aaPredicted RBP4.01□□□□□ -1.77
HPC2YBR215W CDC43P18898 376 aa4.01□□□□□ -1.77
HPC2YBR215W COQ2P32378 372 aa4.01□□□□□ -1.77
HPC2YBR215W SPO73P40031 143 aa4.01□□□□□ -1.77
HPC2YBR215W AVT7P40501 490 aa4.01□□□□□ -1.77
HPC2YBR215W TIR3P40552 269 aa4.01□□□□□ -1.77
HPC2YBR215W SCW11P53189 542 aa4.01□□□□□ -1.77
HPC2YBR215W SCW4P53334 386 aaKnown RBP4.01□□□□□ -1.77
HPC2YBR215W YPL039WQ03080 316 aa4.01□□□□□ -1.77
HPC2YBR215W YMR082CQ04276 118 aa4.01□□□□□ -1.77
HPC2YBR215W YPR174CQ06616 221 aaPredicted RBP4.01□□□□□ -1.77
HPC2YBR215W YDR461C-AQ2V2P7 80 aa4.01□□□□□ -1.77
HPC2YBR215W TDA8Q6B2U8 126 aa4.01□□□□□ -1.77
HPC2YBR215W DDP1Q99321 188 aaKnown RBP4.01□□□□□ -1.77
HPC2YBR215W PDR10P51533 1564 aa4□□□□□ -1.77
HPC2YBR215W RPS8AP0CX39 200 aaKnown RBP4□□□□□ -1.77
HPC2YBR215W RPS8BP0CX40 200 aaKnown RBP4□□□□□ -1.77
HPC2YBR215W TMA19P35691 167 aaKnown RBP4□□□□□ -1.77
HPC2YBR215W SKI6P46948 246 aaPredicted RBP4□□□□□ -1.77
HPC2YBR215W SMD1Q02260 146 aaPredicted RBP4□□□□□ -1.77
HPC2YBR215W ROT1Q03691 256 aa4□□□□□ -1.77
HPC2YBR215W FIT1Q04433 528 aa4□□□□□ -1.77
HPC2YBR215W MIM1Q08176 113 aa4□□□□□ -1.77
HPC2YBR215W MMS22Q06164 1454 aa4□□□□□ -1.77
HPC2YBR215W YMR316C-AI2HB70 103 aa3.99□□□□□ -1.77
HPC2YBR215W YPR170W-BP0C5R9 85 aa3.99□□□□□ -1.77
HPC2YBR215W RPL23AP0CX41 137 aaKnown RBP3.99□□□□□ -1.77
HPC2YBR215W RPL23BP0CX42 137 aaKnown RBP3.99□□□□□ -1.77
HPC2YBR215W HSP12P22943 109 aaKnown RBP3.99□□□□□ -1.77
HPC2YBR215W ERG4P25340 473 aa3.99□□□□□ -1.77
HPC2YBR215W RPL16AP26784 199 aaKnown RBP3.99□□□□□ -1.77
HPC2YBR215W VMA11P32842 164 aa3.99□□□□□ -1.77
HPC2YBR215W YNL200CP40165 246 aaKnown RBP3.99□□□□□ -1.77
HPC2YBR215W EMC4P53073 190 aa3.99□□□□□ -1.77
HPC2YBR215W EST3Q03096 181 aa3.99□□□□□ -1.77
HPC2YBR215W ATG5Q12380 294 aa3.99□□□□□ -1.77
HPC2YBR215W YOR376W-AQ3E805 51 aa3.99□□□□□ -1.77
HPC2YBR215W KSH1Q8TGJ3 72 aa3.99□□□□□ -1.77
HPC2YBR215W CCH1P50077 2039 aa3.99□□□□□ -1.77
HPC2YBR215W MSW1P04803 379 aa3.98□□□□□ -1.77
HPC2YBR215W RPS14AP06367 137 aaKnown RBP3.98□□□□□ -1.77
HPC2YBR215W YAR066WP0CX18 203 aa3.98□□□□□ -1.77
HPC2YBR215W YHR214WP0CX19 203 aa3.98□□□□□ -1.77
HPC2YBR215W YGL010WP25338 174 aa3.98□□□□□ -1.77
HPC2YBR215W RPS14BP39516 138 aaKnown RBP3.98□□□□□ -1.77
HPC2YBR215W YFL065CP43539 102 aa3.98□□□□□ -1.77
HPC2YBR215W YPR203WQ08994 102 aa3.98□□□□□ -1.77
HPC2YBR215W YPL245WQ12179 454 aaKnown RBP3.98□□□□□ -1.77
HPC2YBR215W YCR024C-BQ3E7Z8 88 aa3.98□□□□□ -1.77
HPC2YBR215W SWR1Q05471 1514 aa3.98□□□□□ -1.77
HPC2YBR215W PAI3P01094 68 aa3.98□□□□□ -1.77
HPC2YBR215W YCR025CP25352 136 aa3.98□□□□□ -1.77
HPC2YBR215W MRPL11P36521 249 aaPredicted RBP3.98□□□□□ -1.77
HPC2YBR215W MTC6P38849 526 aa3.98□□□□□ -1.77
HPC2YBR215W EDC2P40023 145 aaPredicted RBP3.98□□□□□ -1.77
HPC2YBR215W VPS25P47142 202 aa3.98□□□□□ -1.77
HPC2YBR215W SWT21P53873 357 aaPredicted RBP3.98□□□□□ -1.77
HPC2YBR215W TDA7P53882 636 aaPredicted RBP3.98□□□□□ -1.77
HPC2YBR215W YMR090WQ04304 227 aaKnown RBP3.98□□□□□ -1.77
HPC2YBR215W NUP170P38181 1502 aa3.97□□□□□ -1.77
HPC2YBR215W SYS1P41544 203 aa3.97□□□□□ -1.77
HPC2YBR215W BNI1P41832 1953 aa3.97□□□□□ -1.77
HPC2YBR215W NUP159P40477 1460 aa3.97□□□□□ -1.77
HPC2YBR215W ECM12O13529 151 aa3.96□□□□□ -1.77
HPC2YBR215W AGA1P32323 725 aa3.96□□□□□ -1.77
HPC2YBR215W GLC7P32598 312 aaKnown RBP3.96□□□□□ -1.77
HPC2YBR215W SMP1P38128 452 aa3.96□□□□□ -1.77
HPC2YBR215W NSG1P38837 291 aa3.96□□□□□ -1.77
HPC2YBR215W CWP2P43497 92 aa3.96□□□□□ -1.77
HPC2YBR215W ATO3Q12359 275 aa3.96□□□□□ -1.77
HPC2YBR215W YBL008W-AQ3E821 79 aa3.96□□□□□ -1.77
HPC2YBR215W FAS2P19097 1887 aaKnown RBP3.96□□□□□ -1.78
HPC2YBR215W TRP1P00912 224 aa3.96□□□□□ -1.78
HPC2YBR215W MIG1P27705 504 aa3.96□□□□□ -1.78
HPC2YBR215W HTD2P38790 280 aaKnown RBP3.96□□□□□ -1.78
HPC2YBR215W RAF1Q06891 181 aa3.96□□□□□ -1.78
HPC2YBR215W GEA1P47102 1408 aaPredicted RBP3.95□□□□□ -1.78
HPC2YBR215W YCR050CP25630 102 aa3.95□□□□□ -1.78
HPC2YBR215W PUB1P32588 453 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
HPC2YBR215W TOD6P34219 525 aa3.95□□□□□ -1.78
HPC2YBR215W SDS23P53172 527 aa3.95□□□□□ -1.78
HPC2YBR215W LPP1Q04396 274 aa3.95□□□□□ -1.78
HPC2YBR215W YLR281CQ05863 155 aa3.95□□□□□ -1.78
HPC2YBR215W CSI2Q08054 341 aa3.95□□□□□ -1.78
HPC2YBR215W YRF1-2P40105 1681 aa3.94□□□□□ -1.78
HPC2YBR215W YMC2P38087 329 aa3.94□□□□□ -1.78
HPC2YBR215W FYV4P38783 130 aaPredicted RBP3.94□□□□□ -1.78
HPC2YBR215W YFL019CP43576 117 aa3.94□□□□□ -1.78
HPC2YBR215W ANT1Q06497 328 aa3.94□□□□□ -1.78
HPC2YBR215W PCL9Q12477 304 aa3.94□□□□□ -1.78
HPC2YBR215W DDR48P18899 430 aaKnown RBP3.94□□□□□ -1.78
HPC2YBR215W YCR099CP25657 155 aa3.94□□□□□ -1.78
HPC2YBR215W ZRT3P34240 503 aa3.94□□□□□ -1.78
HPC2YBR215W NSA2P40078 261 aaKnown RBP3.94□□□□□ -1.78
HPC2YBR215W MSL1P40567 111 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms