RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 PER3P56645 1201 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 KIF23Q02241 960 aaPredicted RBP8.37□□□□□ -1.07
LINC01108-202ENST00000635227 TTF1Q15361 905 aaPredicted RBP8.37□□□□□ -1.07
LINC01108-202ENST00000635227 MFSD14BQ5SR56 506 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 LCE1DQ5T752 114 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01108-202ENST00000635227 RUFY2Q8WXA3 655 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 ST8SIA2Q92186 375 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 LSM14BQ9BX40 385 aaKnown RBP8.37□□□□□ -1.07
LINC01108-202ENST00000635227 LDAHQ9H6V9 325 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 LIMCH1Q9UPQ0 1083 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 LUC7L2Q9Y383 392 aaKnown RBP8.37□□□□□ -1.07
LINC01108-202ENST00000635227 TSC22D4Q9Y3Q8 395 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 BCL9O00512 1426 aa8.37□□□□□ -1.07
LINC01108-202ENST00000635227 CNTNAP1P78357 1384 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 KCPQ6ZWJ8 1503 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 KCNQ3O43525 872 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 SNUPNO95149 360 aaKnown RBP8.36□□□□□ -1.07
LINC01108-202ENST00000635227 EDNRBP24530 442 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 RECQLP46063 649 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-202ENST00000635227 SPDYAQ5MJ70 313 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 ANKS6Q68DC2 871 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 Q6ZRM9 215 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 APBB1IPQ7Z5R6 666 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-202ENST00000635227 ANKRD13AQ8IZ07 590 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 ANKRD35Q8N283 1001 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 MDGA1Q8NFP4 955 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 RILPL2Q969X0 211 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 HOOK2Q96ED9 719 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
LINC01108-202ENST00000635227 CPPED1Q9BRF8 314 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-202ENST00000635227 AASDHPPTQ9NRN7 309 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 DOT1LQ8TEK3 1739 aa8.36□□□□□ -1.07
LINC01108-202ENST00000635227 USP42Q9H9J4 1324 aaKnown RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 EXOC5O00471 708 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 MFAP3LO75121 409 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 ENDOD1O94919 500 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 ADRB1P08588 477 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 IFIT2P09913 472 aaKnown RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 NBPF7P0C2Y1 421 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 HK1P19367 917 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 WASP42768 502 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 SCNN1GP51170 649 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 RABGGTBP53611 331 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 SLC16A1P53985 500 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 MCL1Q07820 350 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 G3BP1Q13283 466 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 PLEKHG6Q3KR16 790 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 GJC2Q5T442 439 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 C1QL3Q5VWW1 255 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 PDZD4Q76G19 769 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 ATXN2LQ8WWM7 1075 aaKnown RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 STON2Q8WXE9 905 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 COA7Q96BR5 231 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 TEX13AQ9BXU3 409 aaPredicted RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 CPEB1Q9BZB8 566 aaKnown RBP8.35□□□□□ -1.07
LINC01108-202ENST00000635227 KCNH6Q9H252 994 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 TESMINQ9Y4I5 508 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 IPPQ9Y573 584 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 ATRNL1Q5VV63 1379 aa8.35□□□□□ -1.07
LINC01108-202ENST00000635227 RAD50Q92878 1312 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 NHSQ6T4R5 1651 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 FAM171A2A8MVW0 826 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 CYP27B1O15528 508 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 HTRA2O43464 458 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 IPO13O94829 963 aaKnown RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 ANXA1P04083 346 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 GUCY1A2P33402 732 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 NUCB2P80303 420 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 AIMP1Q12904 312 aaKnown RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 C3orf36Q3SXR2 165 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 ZNF572Q7Z3I7 529 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 GSPT2Q8IYD1 628 aaKnown RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 CMTR2Q8IYT2 770 aaKnown RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 CPA6Q8N4T0 437 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 PLBD2Q8NHP8 589 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 SLC35B2Q8TB61 432 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 CCHCR1Q8TD31 782 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 OTUD7AQ8TE49 926 aaPredicted RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 PGBD4Q96DM1 585 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 C7orf25Q9BPX7 421 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 LANCL2Q9NS86 450 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 SAP30BPQ9UHR5 308 aaKnown RBP8.34□□□□□ -1.07
LINC01108-202ENST00000635227 GIT1Q9Y2X7 761 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 MYH7P12883 1935 aa8.34□□□□□ -1.07
LINC01108-202ENST00000635227 PNPLA7Q6ZV29 1317 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 FRAT2O75474 233 aaPredicted RBP8.33□□□□□ -1.08
LINC01108-202ENST00000635227 MYL6BP14649 208 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 ALOX15P16050 662 aaPredicted RBP8.33□□□□□ -1.08
LINC01108-202ENST00000635227 FPR1P21462 350 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 FLT3LGP49771 235 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 ADKP55263 362 aaKnown RBP8.33□□□□□ -1.08
LINC01108-202ENST00000635227 SOX10P56693 466 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 SLC39A6Q13433 755 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 GCKRQ14397 625 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 CSRP2Q16527 193 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 PROSER3Q2NL68 480 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 UAP1L1Q3KQV9 507 aa8.33□□□□□ -1.08
LINC01108-202ENST00000635227 FAM47AQ5JRC9 791 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms