RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 UBP1Q9NZI7 540 aa7.52□□□□□ -1.21
CSMD2-210ENST00000619121 AMACRQ9UHK6 382 aa7.52□□□□□ -1.21
CSMD2-210ENST00000619121 CAPN11Q9UMQ6 739 aa7.52□□□□□ -1.21
CSMD2-210ENST00000619121 ACADLP28330 430 aa7.52□□□□□ -1.21
CSMD2-210ENST00000619121 CCDC177Q9NQR7 707 aaPredicted RBP7.52□□□□□ -1.21
CSMD2-210ENST00000619121 SH3BP4Q9P0V3 963 aa7.52□□□□□ -1.21
CSMD2-210ENST00000619121 SLC39A10Q9ULF5 831 aa7.52□□□□□ -1.21
CSMD2-210ENST00000619121 PRG3Q9Y2Y8 225 aaPredicted RBP7.52□□□□□ -1.21
CSMD2-210ENST00000619121 ADGRA3Q8IWK6 1321 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 A0A1W2PQJ5 194 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PRPF4O43172 522 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 EYA4O95677 639 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 URODP06132 367 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 GDPD2Q9HCC8 539 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF711Q9Y462 761 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PCDHB15Q9Y5E8 787 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PCDHA13Q9Y5I0 950 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ZSCAN5CA6NGD5 496 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 MMP10P09238 476 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TUFMP49411 452 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 NAB1Q13506 487 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 CDK20Q8IZL9 346 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 CARD14Q9BXL6 1004 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 GTF2E2P29084 291 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 FASTKD1Q53R41 847 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 THEMIS2Q5TEJ8 643 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TMEM8AQ9HCN3 771 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TLR8Q9NR97 1041 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PKD2L1Q9P0L9 805 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ERBB2P04626 1255 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PPP3CCP48454 512 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TTC7AQ9ULT0 858 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ANKRD6Q9Y2G4 727 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 MADDQ8WXG6 1647 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 POTEMA6NI47 508 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 VPS41P49754 854 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 POTEHQ6S545 545 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 POTEGQ6S5H5 508 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 IL1RAPL1Q9NZN1 696 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PTPN22Q9Y2R2 807 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 FHOD1Q9Y613 1164 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ALBP02768 609 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 KELP23276 732 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ZBED8Q8IZ13 594 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TDRD7Q8NHU6 1098 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 VAT1Q99536 393 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 IRGMA1A4Y4 181 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ERVK-10P10266 1014 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF284Q2VY69 593 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 GREM2Q9H772 168 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 CD209Q9NNX6 404 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TBC1D13Q9NVG8 400 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 BAIAP2L1Q9UHR4 511 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF180Q9UJW8 692 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 BAG2O95816 211 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TPP2P29144 1249 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PEX3P56589 373 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 OR6B2Q6IFH4 312 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 DNAJB7Q7Z6W7 309 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 SPACA7Q96KW9 195 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF335Q9H4Z2 1342 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 SCUBE2Q9NQ36 999 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 SHCBP1Q8NEM2 672 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 RAPGEF5Q92565 580 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 CCDC134Q9H6E4 229 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 EIF3LQ9Y262 564 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 AKAP11Q9UKA4 1901 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 EXTL3O43909 919 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 LSM8O95777 96 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TMPRSS15P98073 1019 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 CYFIP1Q7L576 1253 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PTPRN2Q92932 1015 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 TMEM161AQ9NX61 479 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 UBQLN1Q9UMX0 589 aaKnown RBP7.51□□□□□ -1.21
CSMD2-210ENST00000619121 AP4S1Q9Y587 144 aa7.51□□□□□ -1.21
CSMD2-210ENST00000619121 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 TSTA3Q13630 321 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 NAA35Q5VZE5 725 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 SEPT12Q8IYM1 358 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 ECE2O60344 883 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CCNDBP1O95273 360 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CYP2A6P11509 494 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 GRM4Q14833 912 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 SCN4BQ8IWT1 228 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 ZNF512Q96ME7 567 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 RCOR1Q9UKL0 485 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CD3EAPO15446 510 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 GUCY1A3Q02108 690 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 SULT2A1Q06520 285 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 IFT88Q13099 833 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 CYLC2Q14093 348 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 RESP18Q5W5W9 173 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 ALKBH5Q6P6C2 394 aaKnown RBP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 KIF12Q96FN5 646 aa7.5□□□□□ -1.21
CSMD2-210ENST00000619121 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.5□□□□□ -1.21
CSMD2-210ENST00000619121 RGS18Q9NS28 235 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms