RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 C11orf88Q6PI97 169 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 ZNF280CQ8ND82 737 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 RIN3Q8TB24 985 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 FAM151AQ8WW52 585 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 STMN2Q93045 179 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 DCPSQ96C86 337 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 PCDHB18PQ96TA0 734 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 GPATCH2LQ9NWQ4 482 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 TTC24A2A3L6 582 aaPredicted RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 XRCC5P13010 732 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 MAGEA1P43355 309 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 FNTAP49354 379 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 NCKAP1LP55160 1127 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 PRKCEQ02156 737 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 FAM189A2Q15884 450 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 FAXCQ5TGI0 409 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 FOXR2Q6PJQ5 311 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 HERPUD2Q9BSE4 406 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 TEKT3Q9BXF9 490 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 SPATS2LQ9NUQ6 558 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 PCSK1NQ9UHG2 260 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 TMCO1Q9UM00 188 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 ARHGAP26Q9UNA1 814 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 RWDD3Q9Y3V2 267 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 MYH9P35579 1960 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 DMXL1Q9Y485 3027 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 TNS1Q9HBL0 1735 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 MYADML2A6NDP7 307 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 CLDN5O00501 218 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 SEC24CP53992 1094 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 KNOP1Q1ED39 458 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 ANKRD20A4Q4UJ75 823 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 ANKRD20A2Q5SQ80 823 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 ANKRD20A1Q5TYW2 823 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 ANKRD20A3Q5VUR7 823 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 TAS1R3Q7RTX0 852 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 HAUS6Q7Z4H7 955 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 DNAJB7Q7Z6W7 309 aaPredicted RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 LNX1Q8TBB1 728 aaPredicted RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 PPP4R1Q8TF05 950 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 HCN3Q9P1Z3 774 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 NENFQ9UMX5 172 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 AKT3Q9Y243 479 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 SHBGP04278 402 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 CD48P09326 243 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 CREB1P16220 341 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 HSPA13P48723 471 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 LRRC63Q05C16 580 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 IRF5Q13568 498 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 HGSNATQ68CP4 663 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 SLC39A4Q6P5W5 647 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 SLC35G2Q8TBE7 412 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 CLEC4CQ8WTT0 213 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 ANKS1AQ92625 1134 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 FAM136AQ96C01 138 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 SMURF2Q9HAU4 748 aa3.53□□□□□ -1.84
CHD9-213ENST00000564845 DDX56Q9NY93 547 aaKnown RBP3.53□□□□□ -1.84
CHD9-213ENST00000564845 SOWAHBA6NEL2 793 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 KRT8P05787 483 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 SLC2A3P11169 496 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 DMP1Q13316 513 aaPredicted RBP3.53□□□□□ -1.85
CHD9-213ENST00000564845 LRRC55Q6ZSA7 311 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 UNC13DQ70J99 1090 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 ZNF365Q70YC5 407 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 SNX32Q86XE0 403 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 STX19Q8N4C7 294 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 CCDC89Q8N998 374 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 GLIS1Q8NBF1 620 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 OR8K1Q8NGG5 319 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 ASAP3Q8TDY4 903 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 SKA1Q96BD8 255 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 RNF25Q96BH1 459 aaPredicted RBP3.53□□□□□ -1.85
CHD9-213ENST00000564845 CYP2S1Q96SQ9 504 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 CYTH2Q99418 400 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 PDCD2LQ9BRP1 358 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 ZWILCHQ9H900 591 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 FAM49BQ9NUQ9 324 aa3.53□□□□□ -1.85
CHD9-213ENST00000564845 KANSL1LA0AUZ9 987 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NT5C1B-RDH14C9J2C7 533 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 PYGMP11217 842 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 JAK1P23458 1154 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 SLC26A2P50443 739 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 ACTR2P61160 394 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RPL7AP62424 266 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 AP2B1P63010 937 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 HECTD3Q5T447 861 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 KLHDC7AQ5VTJ3 777 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CCNJLQ8IV13 435 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 RHOT2Q8IXI1 618 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 C19orf60Q96EN9 201 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CYFIP2Q96F07 1278 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 TRIM6Q9C030 488 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 GPBP1L1Q9HC44 474 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 DBR1Q9UK59 544 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 BLOC1S6Q9UL45 172 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CCDC188H7C350 402 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 CELF2O95319 508 aaKnown RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 H2AFXP16104 143 aaPredicted RBP3.52□□□□□ -1.85
CHD9-213ENST00000564845 CDC25CP30307 473 aa3.52□□□□□ -1.85
CHD9-213ENST00000564845 NPTX2P47972 431 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms