RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 STILQ15468 1287 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 LONRF2Q1L5Z9 754 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 TDRD12Q587J7 1177 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 AARS2Q5JTZ9 985 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 TCTE1Q5JU00 501 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 VWA5B1Q5TIE3 1220 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SYDE2Q5VT97 1194 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 TCERG1LQ5VWI1 586 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 C1orf122Q6ZSJ8 110 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ACAD11Q709F0 780 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 LIMS2Q7Z4I7 341 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ZNF677Q86XU0 584 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 COLGALT2Q8IYK4 626 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CNTROBQ8N137 903 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 C17orf53Q8N3J3 647 aaPredicted RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 SLC4A11Q8NBS3 891 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ATAD1Q8NBU5 361 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 IPMKQ8NFU5 416 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 OR10Z1Q8NGY1 313 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 FBXO27Q8NI29 283 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SLC26A7Q8TE54 656 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 SEPT1Q8WYJ6 367 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 RAPGEF5Q92565 580 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 PTPRN2Q92932 1015 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 PPP1R10Q96QC0 940 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 BPIFA3Q9BQP9 254 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CCDC77Q9BR77 488 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 NUDT16L1Q9BRJ7 211 aaKnown RBP6.54□□□□□ -1.36
TDP1-215ENST00000556498 C9orf16Q9BUW7 83 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 WDR18Q9BV38 432 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 RUSC1Q9BVN2 902 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 LRRC3Q9BY71 257 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 RNF208Q9H0X6 261 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CARD9Q9H257 536 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 FANCEQ9HB96 536 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CRLF2Q9HC73 371 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 PDE11AQ9HCR9 933 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 NKIRAS2Q9NYR9 191 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 BTBD7Q9P203 1132 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CTTNBP2NLQ9P2B4 639 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 TELO2Q9Y4R8 837 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 PCDHB12Q9Y5F1 795 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 CTTNBP2Q8WZ74 1663 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ABCA5Q8WWZ7 1642 aa6.54□□□□□ -1.36
TDP1-215ENST00000556498 ITIH6Q6UXX5 1313 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 CUL7Q14999 1698 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 A0A088AWK7 358 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 PVALEFA0A1B0GWK0 134 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 DPPA5A6NC42 116 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 ACOD1A6NK06 481 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 KRIT1O00522 736 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 IRS4O14654 1257 aaPredicted RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 PIP5K1CO60331 668 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 MAFO75444 373 aaPredicted RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 GMNNO75496 209 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 SERPINB7O75635 380 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 DGKIO75912 1065 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 PDHA1P08559 390 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 GHRP10912 638 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 DNAJB1P25685 340 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 IFNA8P32881 189 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 GALNSP34059 522 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 HSPA9P38646 679 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 SLC1A1P43005 524 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 HTR3AP46098 478 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 ADARP55265 1226 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 GSTO1P78417 241 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 RPL6Q02878 288 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 MYO1EQ12965 1108 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 TRPC3Q13507 836 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 TRIM14Q14142 442 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 MPP2Q14168 576 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 NCF4Q15080 339 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 ARSHQ5FYA8 562 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 DCAF17Q5H9S7 520 aaPredicted RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 CLVS2Q5SYC1 327 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 CCNJQ5T5M9 372 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 ATL3Q6DD88 541 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 BRINP3Q76B58 766 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 PTF1AQ7RTS3 328 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 COMTD1Q86VU5 262 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 VPS37DQ86XT2 251 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 SLITRK4Q8IW52 837 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 CD302Q8IX05 232 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 CDH26Q8IXH8 852 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 PPFIBP2Q8ND30 876 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 C7orf57Q8NEG2 295 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 RFWD2Q8NHY2 731 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 TEX47Q8TBZ9 253 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 AFG1LQ8WV93 481 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 RASSF5Q8WWW0 418 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 HDAC11Q96DB2 347 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
TDP1-215ENST00000556498 FERD3LQ96RJ6 166 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 NUP58Q9BVL2 599 aa6.53□□□□□ -1.36
TDP1-215ENST00000556498 TRIM15Q9C019 465 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms