RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
PRKCH-218ENST00000555628 CYP4A22Q5TCH4 519 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 SH3PXD2AQ5TCZ1 1133 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 RNF43Q68DV7 783 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 FSTL4Q6MZW2 842 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 GAREM2Q75VX8 874 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 CEP120Q8N960 986 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 COL26A1Q96A83 441 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
PRKCH-218ENST00000555628 SLKQ9H2G2 1235 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-218ENST00000555628 ASAH2Q9NR71 780 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 POLR3BQ9NW08 1133 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-218ENST00000555628 KCNJ14Q9UNX9 436 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 GDAQ9Y2T3 454 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 YIPF1Q9Y548 306 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 OBSL1O75147 1896 aa9.98□□□□□ -0.81
PRKCH-218ENST00000555628 ADAMTS20P59510 1910 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 A0A087WWV3 80 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 BCLAF3A2AJT9 711 aaKnown RBP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 OTOL1A6NHN0 477 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 C4orf47A7E2U8 309 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 PODXLO00592 558 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 TRAPPC3O43617 180 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 CCNT1O60563 726 aaKnown RBP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 MYL4P12829 197 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 XRCC6P12956 609 aaKnown RBP eCLIP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 CEACAM1P13688 526 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 WEE1P30291 646 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 ELF1P32519 619 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 HSPA4P34932 840 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 CBLBQ13191 982 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 MAPK6Q16659 721 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 ARID3BQ8IVW6 561 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 SLFN12Q8IYM2 578 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 CSGALNACT1Q8TDX6 532 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 ZCCHC14Q8WYQ9 949 aaKnown RBP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 EZH1Q92800 747 aaPredicted RBP9.97□□□□□ -0.81
PRKCH-218ENST00000555628 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 GPR88Q9GZN0 384 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 PTPRHQ9HD43 1115 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 GJB4Q9NTQ9 266 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 OBP2AQ9NY56 170 aa9.97□□□□□ -0.81
PRKCH-218ENST00000555628 TENM4Q6N022 2769 aa9.96□□□□□ -0.81
PRKCH-218ENST00000555628 KCNE1P15382 129 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 NAMPTP43490 491 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 KPNA1P52294 538 aaPredicted RBP9.96□□□□□ -0.82
PRKCH-218ENST00000555628 FGD1P98174 961 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 SSRP1Q08945 709 aaKnown RBP9.96□□□□□ -0.82
PRKCH-218ENST00000555628 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 BLOC1S2Q6QNY1 142 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 PIK3AP1Q6ZUJ8 805 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 ZBTB8OSQ8IWT0 167 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 MCPH1Q8NEM0 835 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 TTC8Q8TAM2 541 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 RIN3Q8TB24 985 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 ZNF512Q96ME7 567 aaPredicted RBP9.96□□□□□ -0.82
PRKCH-218ENST00000555628 MTMR9Q96QG7 549 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 FAM83CQ9BQN1 747 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 KIFC3Q9BVG8 833 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 C2orf40Q9H1Z8 148 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 CDT1Q9H211 546 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 HPS4Q9NQG7 708 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 NEUROG3Q9Y4Z2 214 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 ACACAQ13085 2346 aa9.96□□□□□ -0.82
PRKCH-218ENST00000555628 CCDC194A0A1B0GVG4 234 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 FAM221BA6H8Z2 402 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 H7C4K7 107 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 TRDMT1O14717 391 aaKnown RBP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 DCLK1O15075 740 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 OAZ2O95190 189 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 PROZP22891 400 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 AARSP49588 968 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 ARPP19P56211 112 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 CTXN3Q4LDR2 81 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 SOWAHCQ53LP3 525 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 C6orf118Q5T5N4 469 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 ATF7IP2Q5U623 682 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 NAIF1Q69YI7 327 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 IQCEQ6IPM2 695 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 ZNF280DQ6N043 979 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 MAEAQ7L5Y9 396 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 TMEM130Q8N3G9 435 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 CAMKK1Q8N5S9 505 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 C18orf25Q96B23 403 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 TMEM209Q96SK2 561 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 ADPGKQ9BRR6 497 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 POLR3CQ9BUI4 534 aaPredicted RBP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 FBRSL1Q9HCM7 1045 aaKnown RBP9.95□□□□□ -0.82
PRKCH-218ENST00000555628 EBF1Q9UH73 591 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 TNFSF13BQ9Y275 285 aa9.95□□□□□ -0.82
PRKCH-218ENST00000555628 PCDHB9Q9Y5E1 797 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms