RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SLC7A6OSQ96CW6 309 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 MAK16Q9BXY0 300 aaKnown RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 RBAKQ9NYW8 714 aaPredicted RBP10.08□□□□□ -0.8
CNOT4-212ENST00000541284 SLC9A2Q9UBY0 812 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 USTQ9Y2C2 406 aa10.08□□□□□ -0.8
CNOT4-212ENST00000541284 EDF1O60869 148 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ZBED4O75132 1171 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ASS1P00966 412 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TNNI1P19237 187 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 STX2P32856 288 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 NF2P35240 595 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 RDXP35241 583 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 MSH2P43246 934 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 LIG4P49917 911 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 VCPP55072 806 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 GDF10P55107 478 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 SLC25A11Q02978 314 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 EFTUD2Q15029 972 aaKnown RBP eCLIP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 DALRD3Q5D0E6 543 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 EFHC2Q5JST6 749 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ANKRD22Q5VYY1 191 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ZNF365Q70YC5 407 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ERICH1Q86X53 443 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 RCOR2Q8IZ40 523 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TFAP2BQ92481 460 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 MRPL47Q9HD33 250 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 UBN1Q9NPG3 1134 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 PARVAQ9NVD7 372 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 CYP39A1Q9NYL5 469 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 CYTH4Q9UIA0 394 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 SCINQ9Y6U3 715 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ANP32DO95626 131 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TNFSF9P41273 254 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 CCNG1P51959 295 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 MCL1Q07820 350 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 DNAJC3Q13217 504 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TARBP2Q15633 366 aaKnown RBP10.07□□□□□ -0.8
CNOT4-212ENST00000541284 PDK4Q16654 411 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 MTERF2Q49AM1 385 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 PLEKHG4Q58EX7 1191 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 WDR44Q5JSH3 913 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 LIN9Q5TKA1 542 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 PPP1R21Q6ZMI0 780 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 FAM47EQ6ZV65 393 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 MAB21L3Q8N8X9 362 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 FGD4Q96M96 766 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 LRMDAQ9H2I8 198 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 FBXO40Q9UH90 709 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 PCNTO95613 3336 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 SRCAPQ6ZRS2 3230 aa10.07□□□□□ -0.8
CNOT4-212ENST00000541284 ITGAVP06756 1048 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 IBSPP21815 317 aaPredicted RBP10.06□□□□□ -0.8
CNOT4-212ENST00000541284 EDNRBP24530 442 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 GJC1P36383 396 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 ARSEP51690 589 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 POLGP54098 1239 aaPredicted RBP10.06□□□□□ -0.8
CNOT4-212ENST00000541284 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 XKR3Q5GH77 459 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 HP1BP3Q5SSJ5 553 aaPredicted RBP10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NIM1KQ8IY84 436 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 KLHL29Q96CT2 875 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 BICD1Q96G01 975 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 IP6K2Q9UHH9 426 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 PTPRAP18433 802 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 IL1R2P27930 398 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NAMPTP43490 491 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 PDE4CQ08493 712 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 MORF4L2Q15014 288 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NSMCE1Q8WV22 266 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 GRAMD1AQ96CP6 724 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 MCEEQ96PE7 176 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 TRABDQ9H4I3 376 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 SLC5A4Q9NY91 659 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NKX1-2Q9UD57 310 aaPredicted RBP10.06□□□□□ -0.8
CNOT4-212ENST00000541284 PHTF1Q9UMS5 762 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 EXOC1LA0A1B0GW35 172 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 WFS1O76024 890 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 KRT1P04264 644 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 GNAZP19086 355 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 MYO1EQ12965 1108 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 GPS1Q13098 491 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NCOA4Q13772 614 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 CAPSQ13938 189 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 FNBP1LQ5T0N5 605 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 KAZNQ674X7 775 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NAT8LQ8N9F0 302 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NLGN2Q8NFZ4 835 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 RBM41Q96IZ5 413 aaKnown RBP10.06□□□□□ -0.8
CNOT4-212ENST00000541284 PLCD4Q9BRC7 762 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 TMEM121Q9BTD3 319 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 NIFKQ9BYG3 293 aaKnown RBP10.06□□□□□ -0.8
CNOT4-212ENST00000541284 C10orf88Q9H8K7 445 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 HACL1Q9UJ83 578 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 SHOC2Q9UQ13 582 aa10.06□□□□□ -0.8
CNOT4-212ENST00000541284 TCRBV7S3A2A0A539 114 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms