RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 KCNG1Q9UIX4 513 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 CACNA1EQ15878 2313 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 LAMA1P25391 3075 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 CLDN3O15551 220 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 RDXP35241 583 aaKnown RBP11.31□□□□□ -0.6
COPB1-207ENST00000529866 MATR3P43243 847 aaKnown RBP eCLIP11.31□□□□□ -0.6
COPB1-207ENST00000529866 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 KYAT1Q16773 422 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 ZPBP2Q6X784 338 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 TAS1R3Q7RTX0 852 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 DEFB124Q8NES8 71 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 C2orf15Q8WU43 125 aaKnown RBP11.31□□□□□ -0.6
COPB1-207ENST00000529866 TSPAN18Q96SJ8 248 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 SLC46A2Q9BY10 475 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
COPB1-207ENST00000529866 TDP1Q9NUW8 608 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
COPB1-207ENST00000529866 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
COPB1-207ENST00000529866 CDX4O14627 284 aaPredicted RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 SLC16A4O15374 487 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 MEFVO15553 781 aaPredicted RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 TOP3BO95985 862 aaKnown RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 CLTAP09496 248 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 ARSAP15289 507 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 GALK1P51570 392 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 SMTNP53814 917 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 MCL1Q07820 350 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 PSMD2Q13200 908 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 SLC39A12Q504Y0 691 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 MRPS31Q92665 395 aaKnown RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 CD101Q93033 1021 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 BICD1Q96G01 975 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 ZBTB45Q96K62 511 aaPredicted RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 TIPINQ9BVW5 301 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 NUSAP1Q9BXS6 441 aaKnown RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 LRWD1Q9UFC0 647 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 EVLQ9UI08 416 aaPredicted RBP11.3□□□□□ -0.6
COPB1-207ENST00000529866 DSEQ9UL01 958 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 DNM3Q9UQ16 869 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 MSRB2Q9Y3D2 182 aa11.3□□□□□ -0.6
COPB1-207ENST00000529866 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 OTOL1A6NHN0 477 aaPredicted RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 H0Y626 953 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 H0YCG3 227 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 HYAL3O43820 417 aaPredicted RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 TRIM16O95361 564 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 ATF6P18850 670 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 GJA4P35212 333 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 DPP6P42658 865 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 DHPSP49366 369 aaPredicted RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.63e-8■■■■■ 34.4
COPB1-207ENST00000529866 NEK4P51957 841 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 GUCY1B3Q02153 619 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 SPAG1Q07617 926 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 ZNF268Q14587 947 aaPredicted RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 MTF1Q14872 753 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 ZNF174Q15697 407 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 ECM1Q16610 540 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 METTL23Q86XA0 190 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 DAW1Q8N136 415 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 MAB21L3Q8N8X9 362 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 OR10T2Q8NGX3 314 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 SPPL2BQ8TCT7 592 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 PIGKQ92643 395 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 USP13Q92995 863 aaPredicted RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 ATP2A3Q93084 1043 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 SENP8Q96LD8 212 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 CNOT6LQ96LI5 555 aaKnown RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 ZCWPW1Q9H0M4 648 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 TBX20Q9UMR3 447 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 CCL26Q9Y258 94 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 SMG1Q96Q15 3661 aaKnown RBP11.29□□□□□ -0.6
COPB1-207ENST00000529866 WDFY3Q8IZQ1 3526 aa11.29□□□□□ -0.6
COPB1-207ENST00000529866 DMXL2Q8TDJ6 3036 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 PATE3B3GLJ2 98 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 TAF4O00268 1085 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 ALDH1A2O94788 518 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 U2AF2P26368 475 aaKnown RBP eCLIP11.28□□□□□ -0.67e-14■■□□□ 13.2
COPB1-207ENST00000529866 IFNAR2P48551 515 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 ATXN3P54252 364 aaPredicted RBP11.28□□□□□ -0.6
COPB1-207ENST00000529866 NLRP12P59046 1061 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 LILRA4P59901 499 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 IRX4P78413 519 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 SIM1P81133 766 aaPredicted RBP11.28□□□□□ -0.6
COPB1-207ENST00000529866 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 NR1H3Q13133 447 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 ZBTB6Q15916 424 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 TTC38Q5R3I4 469 aa11.28□□□□□ -0.6
COPB1-207ENST00000529866 KRT79Q5XKE5 535 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms