RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 CYP2C19P33261 490 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 PTPN7P35236 360 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 GABRB2P47870 512 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 GUCY2FP51841 1108 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 CCNG2Q16589 344 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 SCARA3Q6AZY7 606 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 ALKAL1Q6UXT8 129 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 UNC93AQ86WB7 457 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 ATL2Q8NHH9 583 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 HHIPL1Q96JK4 782 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 SNX27Q96L92 541 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 FMO2Q99518 471 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 NT5C1AQ9BXI3 368 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 CELF4Q9BZC1 486 aaKnown RBP15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 TRIM6Q9C030 488 aaPredicted RBP15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 CNTN3Q9P232 1028 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 TLL2Q9Y6L7 1015 aa15.63■□□□□ 0.09
ECHDC1-220ENST00000528402 GOLGA6L10A6NI86 522 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 CA12O43570 354 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 GAS8O95995 478 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 SETSIPP0DME0 302 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 KRT3P12035 628 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 CYP3A5P20815 502 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 PNPLA4P41247 253 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 EIF3BP55884 814 aaKnown RBP15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 NKX3-2P78367 333 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 CAV1Q03135 178 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 FSCN1Q16658 493 aaKnown RBP15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 HADHQ16836 314 aaKnown RBP15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 ODF2Q5BJF6 829 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 MFSD14CQ5VZR4 134 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 AADACL2Q6P093 401 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 DENND1BQ6P3S1 775 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 LCLAT1Q6UWP7 414 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 RUFY4Q6ZNE9 571 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 POLNQ7Z5Q5 900 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 ADAT2Q7Z6V5 191 aaKnown RBP15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 CROCCP2Q86T23 111 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 C7orf31Q8N865 590 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 BBOF1Q8ND07 529 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 HEXIM2Q96MH2 286 aaKnown RBP15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 ZIM3Q96PE6 472 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 SDCBP2Q9H190 292 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 SPC25Q9HBM1 224 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 EFR3BQ9Y2G0 817 aa15.62■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM170AA1A519 330 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 NDC80O14777 642 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 PPFIA2O75334 1257 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 TJP3O95049 919 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 KRT7P08729 469 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 ITIH2P19823 946 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 CDH8P55286 799 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 FCGRTP55899 365 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 PURAQ00577 322 aaKnown RBP15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 SNX17Q15036 470 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 TRADDQ15628 312 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 XKR4Q5GH76 650 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 RSPH3Q86UC2 560 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 FAM76AQ8TAV0 307 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 CCHCR1Q8TD31 782 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 IPO4Q8TEX9 1081 aaKnown RBP15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 DNAJB3Q8WWF6 145 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 OSMRQ99650 979 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 FRMD8P1Q9BZ68 369 aaPredicted RBP15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 OSBPL8Q9BZF1 889 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 TRIM7Q9C029 511 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 ELOVL4Q9GZR5 314 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 SMYD3Q9H7B4 428 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 SYNCQ9H7C4 482 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 SNTG2Q9NY99 539 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 WHRNQ9P202 907 aa15.61■□□□□ 0.09
ECHDC1-220ENST00000528402 GOLGA6CA6NDK9 693 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 M0QZ92 97 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 O00370 1275 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 GOLGA6DP0CG33 693 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 KCNE1P15382 129 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 SSR1P43307 286 aaKnown RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 RAP1GAPP47736 663 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 GJA9P57773 515 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PSMC1P62191 440 aaKnown RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 CALCOCO2Q13137 446 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 SLMAPQ14BN4 828 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 CCL14Q16627 93 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 C2CD6Q53TS8 623 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 DRICH1Q6PGQ1 229 aaPredicted RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 CEP128Q6ZU80 1094 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 ZNF771Q7L3S4 317 aaPredicted RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 PHLDB2Q86SQ0 1253 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 DDX42Q86XP3 938 aaKnown RBP eCLIP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 CCDC50Q8IVM0 306 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 ZDHHC14Q8IZN3 488 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 ZNF560Q96MR9 790 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 MCEEQ96PE7 176 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 TRIM51Q9BSJ1 452 aa15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 MTG1Q9BT17 334 aaPredicted RBP15.6■□□□□ 0.09
ECHDC1-220ENST00000528402 DCLK3Q9C098 648 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms