RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 DUSP6Q16828 381 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CFAP221Q4G0U5 840 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 SCARA3Q6AZY7 606 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 SPOPLQ6IQ16 392 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 LILRA6Q6PI73 481 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CYP26C1Q6V0L0 522 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 C4orf50Q6ZRC1 276 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 TAS1R1Q7RTX1 841 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CEP57Q86XR8 500 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 PPM1KQ8N3J5 372 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 RNF214Q8ND24 703 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 OR6B3Q8NGW1 331 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 MYCBPAPQ8TBZ2 947 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 HASPINQ8TF76 798 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 RABGGTAQ92696 567 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 SYN2Q92777 582 aaPredicted RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 FAM84AQ96KN4 292 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 KLHL5Q96PQ7 755 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 PKMYT1Q99640 499 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 RTP3Q9BQQ7 232 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CLSTN3Q9BQT9 956 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 MRPL45Q9BRJ2 306 aaKnown RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CRACR2AQ9BSW2 395 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 PI4K2AQ9BTU6 479 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 TTYH3Q9C0H2 523 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 GANQ9H2C0 597 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 SNX25Q9H3E2 840 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 UBE2TQ9NPD8 197 aaPredicted RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 ENTPD7Q9NQZ7 604 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 CISHQ9NSE2 258 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 IFNKQ9P0W0 207 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 NXF1Q9UBU9 619 aaKnown RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 AFF4Q9UHB7 1163 aaKnown RBP6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 DNAJC12Q9UKB3 198 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 MTUS1Q9ULD2 1270 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 MTCH2Q9Y6C9 303 aa6.79□□□□□ -1.32
IGHV4-55-201ENST00000520889 PRRC2BQ5JSZ5 2229 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ATP8B3O60423 1300 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 DENND4CQ5VZ89 1909 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 RANBP2P49792 3224 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 A8MXQ7 604 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 I3L4J1 428 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 TEX28O15482 410 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CLASP2O75122 1294 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CNPP09543 421 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 VDRP11473 427 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CDC25BP30305 580 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 HOXA9P31269 272 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 TUFMP49411 452 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CLCN4P51793 760 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 RAD23BP54727 409 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 PLD1Q13393 1074 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ARHGAP17Q68EM7 881 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 SPECC1LQ69YQ0 1117 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 PRSS55Q6UWB4 352 aaPredicted RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 VSTM1Q6UX27 236 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CCDC149Q6ZUS6 474 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 SPRED2Q7Z698 418 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 OSTM1Q86WC4 334 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ZNF677Q86XU0 584 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 VSTM4Q8IW00 320 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ARHGEF19Q8IW93 802 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 DRC7Q8IY82 874 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 TCEAL8Q8IYN2 117 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 FAM71AQ8IYT1 594 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 EFHBQ8N7U6 833 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 B3GALNT2Q8NCR0 500 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CMASQ8NFW8 434 aaPredicted RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 OR10T2Q8NGX3 314 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 MICAL1Q8TDZ2 1067 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 WHAMMQ8TF30 809 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 GDPD5Q8WTR4 605 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 SLC22A17Q8WUG5 538 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CASP10Q92851 521 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 TMEM176AQ96HP8 235 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 LRCH3Q96II8 777 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 KREMEN1Q96MU8 473 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 HNRNPABQ99729 332 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 SYT15Q9BQS2 421 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 LSM14BQ9BX40 385 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 UBXN6Q9BZV1 441 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 TRIM5Q9C035 493 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 SDCBP2Q9H190 292 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 SMYD3Q9H7B4 428 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 PNPLA8Q9NP80 782 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 DZANK1Q9NVP4 752 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 FBXW11Q9UKB1 542 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 POLIQ9UNA4 740 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 CDY1Q9Y6F8 540 aa6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 ZNF638Q14966 1978 aaKnown RBP6.78□□□□□ -1.32
IGHV4-55-201ENST00000520889 TRANK1O15050 2925 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 CHD9Q3L8U1 2897 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 WDR27A2RRH5 827 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 GOLGA6L3A6NEY3 463 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 HIDE1A8MVS5 230 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 F8VZ95 297 aa6.77□□□□□ -1.33
IGHV4-55-201ENST00000520889 TULP1O00294 542 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms