RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 SPACA3Q8IXA5 215 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 PPM1KQ8N3J5 372 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 MMP19Q99542 508 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 YIPF4Q9BSR8 244 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 YIPF2Q9BWQ6 316 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 MYH16Q9H6N6 1097 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 NOL6Q9H6R4 1146 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 GP6Q9HCN6 339 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 SSU72Q9NP77 194 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 STARD5Q9NSY2 213 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 INTS7Q9NVH2 962 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 ZIM2Q9NZV7 527 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 WHRNQ9P202 907 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 CGGBP1Q9UFW8 167 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 NOB1Q9ULX3 412 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 APOBEC2Q9Y235 224 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 EMC9Q9Y3B6 208 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 ASTN1O14525 1302 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 MN1Q10571 1320 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 FAM95CA0A1B0GW59 222 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 DDTLA6NHG4 134 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MEIS1O00470 390 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 NOP56O00567 594 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 NEMP1O14524 444 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GPR39O43194 453 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 DYNC1LI2O43237 492 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PRPF3O43395 683 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 AKAP10O43572 662 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 CST3P01034 146 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 SNRPB2P08579 225 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 CCDC192P0DO97 292 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 CKBP12277 381 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ITGA4P13612 1032 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PRF1P14222 555 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 RAB6AP20340 208 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 IGHMBP2P38935 993 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ECI1P42126 302 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MCAMP43121 646 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ALDH7A1P49419 539 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GFRA1P56159 465 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 IRX4P78413 519 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PTGISQ16647 500 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PIK3R6Q5UE93 754 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 BROXQ5VW32 411 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PLPP4Q5VZY2 271 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GTF2IRD2BQ6EKJ0 949 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 CATSPERGQ6ZRH7 1159 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 USP53Q70EK8 1073 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ARMCX6Q7L4S7 300 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ZAR1Q86SH2 424 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 CDH24Q86UP0 819 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GTF2IRD2Q86UP8 949 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 SHISA5Q8N114 240 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MSL3Q8N5Y2 521 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 TMEM145Q8NBT3 493 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 SMG8Q8ND04 991 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GSTCDQ8NEC7 633 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MORC4Q8TE76 937 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 SSC4DQ8WTU2 575 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GAB3Q8WWW8 586 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 KREMEN1Q96MU8 473 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MIPEPQ99797 713 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MRIQ9BWK5 157 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 TMPRSS13Q9BYE2 586 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ATXN3LQ9H3M9 355 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PIDD1Q9HB75 910 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 AASDHPPTQ9NRN7 309 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 FAM105AQ9NUU6 356 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 TRHDEQ9UKU6 1024 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 MRPS17Q9Y2R5 130 aaKnown RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 GPR55Q9Y2T6 319 aaPredicted RBP3.9□□□□□ -1.79
CPNE3-204ENST00000517862 ACTL7BQ9Y614 415 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 C2orf16Q68DN1 1984 aa3.9□□□□□ -1.79
CPNE3-204ENST00000517862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.9□□□□□ -1.791e-6■■■■□ 25.3
CPNE3-204ENST00000517862 PI4KAP42356 2102 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 BCLAF3A2AJT9 711 aaKnown RBP3.89□□□□□ -1.79
CPNE3-204ENST00000517862 FAM149AA5PLN7 773 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 TMEM200CA6NKL6 621 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ZNF891A8MT65 544 aaPredicted RBP3.89□□□□□ -1.79
CPNE3-204ENST00000517862 PATE3B3GLJ2 98 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 M0R2C6 588 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 MEFVO15553 781 aaPredicted RBP3.89□□□□□ -1.79
CPNE3-204ENST00000517862 N4BP1O75113 896 aaKnown RBP3.89□□□□□ -1.79
CPNE3-204ENST00000517862 VAMP4O75379 141 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 TAF5LO75529 589 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 CRTAMO95727 393 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ANXA1P04083 346 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 PTGS1P23219 599 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 CSTF2P33240 577 aaKnown RBP eCLIP3.89□□□□□ -1.79
CPNE3-204ENST00000517862 IL13P35225 146 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 IGFALSP35858 605 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 RGS3P49796 1198 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 UCNP55089 124 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 LINC00310P59036 64 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 ZNF445P59923 1031 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 GABREP78334 506 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 CYP27A1Q02318 531 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 UBE3AQ05086 875 aa3.89□□□□□ -1.79
CPNE3-204ENST00000517862 CHRNDQ07001 517 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms