RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 CDKL5O76039 1030 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 CFIP05156 583 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
CAST-242ENST00000515063 POU3F3P20264 500 aaPredicted RBP4.47□□□□□ -1.69
CAST-242ENST00000515063 DDIT3P35638 169 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 WASP42768 502 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 ALDH1A3P47895 512 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 CSRP2Q16527 193 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 ABHD17BQ5VST6 288 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 ZNF529Q6P280 563 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 FOXR2Q6PJQ5 311 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 Q6ZPA2 131 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 CLEC17AQ6ZS10 378 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 SEM1Q6ZVN7 128 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 VRK3Q8IV63 474 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 MAPKAPK5Q8IW41 473 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 FBXO18Q8NFZ0 1043 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 NLGN4YQ8NFZ3 816 aaPredicted RBP4.47□□□□□ -1.69
CAST-242ENST00000515063 CCHCR1Q8TD31 782 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 COQ10AQ96MF6 247 aa4.47□□□□□ -1.69
CAST-242ENST00000515063 CEP170BQ9Y4F5 1589 aaPredicted RBP4.47□□□□□ -1.69
CAST-242ENST00000515063 MAP3K19Q56UN5 1328 aa4.46□□□□□ -1.69
CAST-242ENST00000515063 ADGRL3Q9HAR2 1447 aa4.46□□□□□ -1.69
CAST-242ENST00000515063 TUBGCP6Q96RT7 1819 aa4.46□□□□□ -1.69
CAST-242ENST00000515063 KDM3BQ7LBC6 1761 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 NWD1Q149M9 1564 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 MED1Q15648 1581 aaPredicted RBP4.46□□□□□ -1.7
CAST-242ENST00000515063 MSH6P52701 1360 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 PLEKHG2Q9H7P9 1386 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 IBTKQ9P2D0 1353 aaPredicted RBP4.46□□□□□ -1.7
CAST-242ENST00000515063 GRID2IPA4D2P6 1211 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 MARCH11A6NNE9 402 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 ZNF185O15231 689 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 LPXNO60711 386 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 GNAI3P08754 354 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 HOXB7P09629 217 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 HKR1P10072 659 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 DDCP20711 480 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 GCSHP23434 173 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 ZFP36P26651 326 aaKnown RBP4.46□□□□□ -1.7
CAST-242ENST00000515063 KRT85P78386 507 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 ITKQ08881 620 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 UBXN2BQ14CS0 331 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 SEPT2Q15019 361 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 ACAP2Q15057 778 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 RABEP1Q15276 862 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 ERCC6LQ2NKX8 1250 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 HSP90AB2PQ58FF8 381 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 TTC22Q5TAA0 569 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 HECTD2Q5U5R9 776 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 SYDE2Q5VT97 1194 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 CCDC30Q5VVM6 783 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 TSHZ3Q63HK5 1081 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 PPP4R3AQ6IN85 833 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 CEP85Q6P2H3 762 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 CASC1Q6TDU7 716 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 PCSK4Q6UW60 755 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 FAM43AQ8N2R8 423 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 NGDNQ8NEJ9 315 aaKnown RBP4.46□□□□□ -1.7
CAST-242ENST00000515063 SLC9A6Q92581 669 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 CAVIN3Q969G5 261 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 HDAC10Q969S8 669 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 MTMR8Q96EF0 704 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 GPATCH3Q96I76 525 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 AGAP2Q99490 1192 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 THUMPD2Q9BTF0 503 aaKnown RBP4.46□□□□□ -1.7
CAST-242ENST00000515063 FAM126AQ9BYI3 521 aaPredicted RBP4.46□□□□□ -1.7
CAST-242ENST00000515063 WDR11Q9BZH6 1224 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 LDAHQ9H6V9 325 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 KLHL11Q9NVR0 708 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 ANKFY1Q9P2R3 1169 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 SPEF1Q9Y4P9 236 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 OVOS2A0A0G2JMS6 1433 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 NCAPD2Q15021 1401 aa4.46□□□□□ -1.7
CAST-242ENST00000515063 LTN1O94822 1766 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 LMO7Q8WWI1 1683 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 A0A1B0GTW7 788 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 SHTN1A0MZ66 631 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 PIPSLA2A3N6 862 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 KLHL33A6NCF5 533 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 TGM1P22735 817 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 AMPHP49418 695 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 MCM2P49736 904 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 EXOSC10Q01780 885 aaKnown RBP4.45□□□□□ -1.7
CAST-242ENST00000515063 RESTQ13127 1097 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 MTM1Q13496 603 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 MTHFSDQ2M296 383 aaKnown RBP4.45□□□□□ -1.7
CAST-242ENST00000515063 INAVAQ3KP66 663 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 METRNLQ641Q3 311 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 Q6YL49 198 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 RSPH3Q86UC2 560 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 DNAJC10Q8IXB1 793 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 RHOT1Q8IXI2 618 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 FITM2Q8N6M3 262 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 C1orf162Q8NEQ5 155 aaPredicted RBP4.45□□□□□ -1.7
CAST-242ENST00000515063 STON2Q8WXE9 905 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 STK31Q9BXU1 1019 aa4.45□□□□□ -1.7
CAST-242ENST00000515063 GALNT9Q9HCQ5 603 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms