RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 LPIN3Q9BQK8 851 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CCDC113Q9H0I3 377 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 ZSWIM4Q9H7M6 989 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 POLMQ9NP87 494 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 CIZ1Q9ULV3 898 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 TIMM13Q9Y5L4 95 aaPredicted RBP9.99□□□□□ -0.81
NUP54-211ENST00000512151 PLXND1Q9Y4D7 1925 aa9.99□□□□□ -0.81
NUP54-211ENST00000512151 CEP192Q8TEP8 1941 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 K7EQS6 105 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 MAP3K13O43283 966 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 DGAT1O75907 488 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 LIG1P18858 919 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 PLD1Q13393 1074 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 NBR1Q14596 966 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 DUOXA1Q1HG43 343 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 INF2Q27J81 1249 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 C2orf27AQ580R0 203 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 NT5DC1Q5TFE4 455 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 CENPPQ6IPU0 288 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 TMEM150AQ86TG1 271 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 NAXDQ8IW45 347 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 SFTPA1Q8IWL2 248 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 CMTM8Q8IZV2 173 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 TBC1D32Q96NH3 1257 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 BACH2Q9BYV9 841 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 CLMPQ9H6B4 373 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 ECT2Q9H8V3 914 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 ANO2Q9NQ90 1003 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 TOR4AQ9NXH8 423 aa9.98□□□□□ -0.81
NUP54-211ENST00000512151 MUC22E2RYF6 1773 aaPredicted RBP9.97□□□□□ -0.81
NUP54-211ENST00000512151 PIEZO2Q9H5I5 2752 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 MTMR11A4FU01 709 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 ACKR2O00590 384 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 USO1O60763 962 aaKnown RBP9.97□□□□□ -0.81
NUP54-211ENST00000512151 ALDH1A3P47895 512 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 RARRES1P49788 294 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 NLRP5P59047 1200 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 NTRK3Q16288 839 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 CRY1Q16526 586 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 LSM14AQ8ND56 463 aaKnown RBP9.97□□□□□ -0.81
NUP54-211ENST00000512151 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 FAM20AQ96MK3 541 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 ADPGKQ9BRR6 497 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 MMP17Q9ULZ9 603 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 PCDHB8Q9UN66 801 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 APOBEC2Q9Y235 224 aaKnown RBP9.97□□□□□ -0.81
NUP54-211ENST00000512151 ASB3Q9Y575 518 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 NUB1Q9Y5A7 615 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 PCDHB9Q9Y5E1 797 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 DENND4CQ5VZ89 1909 aa9.97□□□□□ -0.81
NUP54-211ENST00000512151 ZNF638Q14966 1978 aaKnown RBP9.97□□□□□ -0.81
NUP54-211ENST00000512151 FAM149AA5PLN7 773 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 DKK1O94907 266 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 OAZ2O95190 189 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 LYPLA2O95372 231 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 LARGE1O95461 756 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 MCM4P33991 863 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 HOXD12P35452 270 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 RCAN1P53805 252 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 CFHR1Q03591 330 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 GPR17Q13304 367 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 ADCK5Q3MIX3 580 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 DCAF4L1Q3SXM0 396 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 DHX32Q7L7V1 743 aaKnown RBP9.96□□□□□ -0.82
NUP54-211ENST00000512151 GLRX5Q86SX6 157 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 ZBTB8OSQ8IWT0 167 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 MAB21L3Q8N8X9 362 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 APPL2Q8NEU8 664 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 CEP76Q8TAP6 659 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 PIGOQ8TEQ8 1089 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 HSD17B14Q9BPX1 270 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 EIF2AK1Q9BQI3 630 aaKnown RBP9.96□□□□□ -0.82
NUP54-211ENST00000512151 KIFC3Q9BVG8 833 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 SLC26A6Q9BXS9 759 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 IGSF5Q9NSI5 407 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 PCOLCE2Q9UKZ9 415 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 PCDHA4Q9UN74 947 aa9.96□□□□□ -0.82
NUP54-211ENST00000512151 OBSL1O75147 1896 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 SGK1O00141 431 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 FGF19O95750 216 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 ATXN1LP0C7T5 689 aaKnown RBP9.95□□□□□ -0.82
NUP54-211ENST00000512151 CPA1P15085 419 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 ATF6P18850 670 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 NMT1P30419 496 aaKnown RBP9.95□□□□□ -0.82
NUP54-211ENST00000512151 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
NUP54-211ENST00000512151 OPRD1P41143 372 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 OSTNP61366 133 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 AMPD2Q01433 879 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 MESP2Q0VG99 397 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 SLC14A1Q13336 389 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 PDGFRLQ15198 375 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 GAB4Q2WGN9 574 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 SPDYCQ5MJ68 293 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 ATF7IP2Q5U623 682 aa9.95□□□□□ -0.82
NUP54-211ENST00000512151 TXNDC8Q6A555 127 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms