RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 HHIPQ96QV1 700 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 TRIM6Q9C030 488 aaPredicted RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 TIMMDC1Q9NPL8 285 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 XPNPEP1Q9NQW7 623 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 RBM28Q9NW13 759 aaKnown RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 GTSE1Q9NYZ3 720 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 CEP72Q9P209 647 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 RBM8AQ9Y5S9 174 aaKnown RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 HELZP42694 1942 aaKnown RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 PIEZO2Q9H5I5 2752 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CCDC194A0A1B0GVG4 234 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 I3L4J1 428 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 INO80B-WBP1J3KQ70 363 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 PRRG1O14668 218 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 KHNYNO15037 678 aaKnown RBP7.72□□□□□ -1.17
VCAN-206ENST00000505615 ASAP2O43150 1006 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 RHOBTB1O94844 696 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 GSPT1P15170 499 aaKnown RBP7.72□□□□□ -1.17
VCAN-206ENST00000505615 ATF2P15336 505 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CDC27P30260 824 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 FAM193AP78312 1265 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 SIM1P81133 766 aaPredicted RBP7.72□□□□□ -1.17
VCAN-206ENST00000505615 TNK2Q07912 1038 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CAPSQ13938 189 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 RTN1Q16799 776 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 SLC27A1Q6PCB7 646 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 ANKS3Q6ZW76 656 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CHD1LQ86WJ1 897 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 YAF2Q8IY57 180 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CHCHD4Q8N4Q1 142 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CAMKK1Q8N5S9 505 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 C3orf58Q8NDZ4 430 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 ASAP3Q8TDY4 903 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 E2F7Q96AV8 911 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CCDC136Q96JN2 1154 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 CEP170P1Q96L14 293 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 MKNK1Q9BUB5 465 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 LRRC3Q9BY71 257 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 MKL2Q9ULH7 1088 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 SLC8A2Q9UPR5 921 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 PPME1Q9Y570 386 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 ATMQ13315 3056 aa7.72□□□□□ -1.17
VCAN-206ENST00000505615 DOPEY2Q9Y3R5 2298 aa7.71□□□□□ -1.17
VCAN-206ENST00000505615 A0A1B0GUA9 196 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 EIF4E1BA6NMX2 242 aaKnown RBP7.71□□□□□ -1.18
VCAN-206ENST00000505615 UPK3BL1B0FP48 263 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 UPK3BL2E5RIL1 263 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 H0Y626 953 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 SGSM2O43147 1006 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 RECQL4O94761 1208 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 TRIM16O95361 564 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 TDP2O95551 362 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 PRKCBP05771 671 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 THP07101 528 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 MYL4P12829 197 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 PLA2G2AP14555 144 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 CHMLP26374 656 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 BRCC3P46736 316 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 NUCB1Q02818 461 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 SEMA3BQ13214 749 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 KARSQ15046 597 aaKnown RBP7.71□□□□□ -1.18
VCAN-206ENST00000505615 Q4G0T1 1027 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 TMEM196Q5HYL7 178 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 STXBP5Q5T5C0 1151 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 CYP4A22Q5TCH4 519 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 RNF20Q5VTR2 975 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 B4GALNT3Q6L9W6 998 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 TMC8Q8IU68 726 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 LURAP1LQ8IV03 231 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 LEMD2Q8NC56 503 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 HNRNPLLQ8WVV9 542 aaKnown RBP7.71□□□□□ -1.18
VCAN-206ENST00000505615 TCP11Q8WWU5 503 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 LRIG1Q96JA1 1093 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 TMEM209Q96SK2 561 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 CYP4F11Q9HBI6 524 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 C6orf50Q9HD87 102 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 EVLQ9UI08 416 aaPredicted RBP7.71□□□□□ -1.18
VCAN-206ENST00000505615 GDF2Q9UK05 429 aaPredicted RBP7.71□□□□□ -1.18
VCAN-206ENST00000505615 BRPF3Q9ULD4 1205 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 RAXQ9Y2V3 346 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 HRH3Q9Y5N1 445 aa7.71□□□□□ -1.18
VCAN-206ENST00000505615 SPTAN1Q13813 2472 aaKnown RBP7.71□□□□□ -1.18
VCAN-206ENST00000505615 ANK1P16157 1881 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 ZBTB39O15060 712 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 TBX3O15119 743 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 B3GAT3O94766 335 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 VNN2O95498 520 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 PRAMEF12O95522 483 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 EGFP01133 1207 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 BCKDHBP21953 392 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 ELF1P32519 619 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 QARSP47897 775 aaKnown RBP7.7□□□□□ -1.18
VCAN-206ENST00000505615 USP11P51784 963 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 POU5F1BQ06416 359 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 C19orf57Q0VDD7 668 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 TWF1Q12792 350 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 ARHGAP29Q52LW3 1261 aa7.7□□□□□ -1.18
VCAN-206ENST00000505615 ARID3BQ8IVW6 561 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms