RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 TRIM51Q9BSJ1 452 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 TXLNGYQ9BZA5 131 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 DCLK3Q9C098 648 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 SYNCQ9H7C4 482 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 UBQLN1Q9UMX0 589 aaKnown RBP11.98□□□□□ -0.49
NFKB1-205ENST00000505458 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.98□□□□□ -0.49
NFKB1-205ENST00000505458 HAS3O00219 553 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 DARSP14868 501 aaKnown RBP11.98□□□□□ -0.49
NFKB1-205ENST00000505458 PSEN2P49810 448 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 OSTNP61366 133 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 RASAL3Q86YV0 1011 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 CEP120Q8N960 986 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 UBLCP1Q8WVY7 318 aaPredicted RBP11.98□□□□□ -0.49
NFKB1-205ENST00000505458 ART4Q93070 314 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 TMEM109Q9BVC6 243 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 NT5C1AQ9BXI3 368 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 PABPC3Q9H361 631 aaKnown RBP11.98□□□□□ -0.49
NFKB1-205ENST00000505458 TMBIM4Q9HC24 238 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 ZFYVE28Q9HCC9 887 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 GJB1P08034 283 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 CYP2C9P11712 490 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 TAF2Q6P1X5 1199 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 ILDR2Q71H61 639 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 ZDHHC17Q8IUH5 632 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 USP6NLQ92738 828 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 KIF12Q96FN5 646 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 SNX27Q96L92 541 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 CYLDQ9NQC7 956 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.98□□□□□ -0.49
NFKB1-205ENST00000505458 AGAP1Q9UPQ3 857 aa11.98□□□□□ -0.49
NFKB1-205ENST00000505458 IQCF3P0C7M6 154 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 RARGP13631 454 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 CYP3A5P20815 502 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 IFFO1Q0D2I5 559 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 NFX1Q12986 1120 aaKnown RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 CEP85LQ5SZL2 805 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 GJC2Q5T442 439 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 CXorf38Q8TB03 319 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 PTPN18Q99952 460 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 PDCD11Q14690 1871 aaKnown RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 SMAPO00193 183 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 DYNC1LI2O43237 492 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 KRT1P04264 644 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 KRT3P12035 628 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 PMS2P54278 862 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 CHADLQ6NUI6 762 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 HACE1Q8IYU2 909 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 SLC4A11Q8NBS3 891 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 PIK3R5Q8WYR1 880 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 TRAIPQ9BWF2 469 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 TRIM6Q9C030 488 aaPredicted RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 CNTN3Q9P232 1028 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 NR2E1Q9Y466 385 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 ERBB2P04626 1255 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 ATF2P15336 505 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 SSR1P43307 286 aaKnown RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 ADCY2Q08462 1091 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 LCLAT1Q6UWP7 414 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 FAM84AQ96KN4 292 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 MCEEQ96PE7 176 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 CNOT10Q9H9A5 744 aaKnown RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 ASNSD1Q9NWL6 643 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 GRHL1Q9NZI5 618 aa11.97□□□□□ -0.49
NFKB1-205ENST00000505458 DRG1Q9Y295 367 aaKnown RBP11.97□□□□□ -0.49
NFKB1-205ENST00000505458 MGAMO43451 1857 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 SCNN1AP37088 669 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 KRT17Q04695 432 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 TMEM63BQ5T3F8 832 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 VSIG1Q86XK7 387 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 CPB2Q96IY4 423 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 CAPS2Q9BXY5 557 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 ROPN1BQ9BZX4 212 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 ROPN1Q9HAT0 212 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 RRAGCQ9HB90 399 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 ASIC3Q9UHC3 531 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 POLIQ9UNA4 740 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 SNX24Q9Y343 169 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 RNF8O76064 485 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 PCK1P35558 622 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 CRYBB1P53674 252 aaPredicted RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 PLTPP55058 493 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 PSMC1P62191 440 aaKnown RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 TFDP3Q5H9I0 405 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 TTC27Q6P3X3 843 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 ADAT2Q7Z6V5 191 aaKnown RBP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 RSPH3Q86UC2 560 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 DDX42Q86XP3 938 aaKnown RBP eCLIP11.96□□□□□ -0.49
NFKB1-205ENST00000505458 TFAP2BQ92481 460 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 MCRS1Q96EZ8 462 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 PHACTR1Q9C0D0 580 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 SETD4Q9NVD3 440 aa11.96□□□□□ -0.49
NFKB1-205ENST00000505458 CHORDC1Q9UHD1 332 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms