RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PCYOX1LQ8NBM8 494 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 CYFIP2Q96F07 1278 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 PRLRP16471 622 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 SLC29A2Q14542 456 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 CNGA3Q16281 694 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 SMTNL2Q2TAL5 461 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 MDH1BQ5I0G3 518 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 NAPEPLDQ6IQ20 393 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 LVRNQ6Q4G3 990 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 TTC30AQ86WT1 665 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 PPP1R36Q96LQ0 422 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 PRPF4O43172 522 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 TCF7P36402 384 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 IRAK1P51617 712 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 ERVK-24P63145 666 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 IL31Q6EBC2 164 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 KBTBD4Q9NVX7 518 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 MARCOQ9UEW3 520 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 CDYLQ9Y232 598 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF263O14978 683 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 FAM107AO95990 144 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 TMEM62Q0P6H9 643 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 STKLD1Q8NE28 680 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 CDY2AQ9Y6F7 541 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 CDY1Q9Y6F8 540 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 ZC3H11AO75152 810 aaKnown RBP eCLIP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 SREBF1P36956 1147 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 TAF6P49848 677 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 KRT72Q14CN4 511 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 CAPRIN2Q6IMN6 1127 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 FAM71DQ8N9W8 422 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 C1orf131Q8NDD1 294 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 TRPC7Q9HCX4 862 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 MED24O75448 989 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 MAPK7Q13164 816 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 PATL1Q86TB9 770 aaKnown RBP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 MANSC1Q9H8J5 431 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 MEGF6O75095 1541 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 SYTL3Q4VX76 610 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 SETD3Q86TU7 594 aaPredicted RBP17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 FOPNLQ96NB1 174 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 L2HGDHQ9H9P8 463 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 PKD2L2Q9NZM6 624 aa17.25■□□□□ 0.35
PCDHA1-203ENST00000504120 A0A087X0T9 212 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 HMBSP08397 361 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 FAM228BP0C875 321 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ENO3P13929 434 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 PTK6Q13882 451 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 GTF2H3Q13889 308 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 RBM43Q6ZSC3 357 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 TBC1D19Q8N5T2 526 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 E2F7Q96AV8 911 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 UBQLN1Q9UMX0 589 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ITGB3P05106 788 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 PLEKP08567 350 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 FAM200BP0CF97 657 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 CETPP11597 493 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 HSD17B3P37058 310 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 PTGER2P43116 358 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ZC3H12BQ5HYM0 836 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 CYP4A22Q5TCH4 519 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 SHCBP1Q8NEM2 672 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 TEKT4Q8WW24 435 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 TMA16Q96EY4 203 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 OGTO15294 1046 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 NPTXRO95502 500 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 FDFT1P37268 417 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 MED21Q13503 144 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 NBPF20Q3BBV1 942 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 TTI2Q6NXR4 508 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 LINC00523Q86TU6 105 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 TTC30BQ8N4P2 665 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 SPATA17Q96L03 361 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ZNF512Q96ME7 567 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 NEUROG2Q9H2A3 272 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 CCDC78A2IDD5 438 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 CCT8L1PA6NM43 557 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 LRRIQ3A6PVS8 624 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 SRP72O76094 671 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ST8SIA6P61647 398 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ANKS3Q6ZW76 656 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 ZFYVE28Q9HCC9 887 aa17.24■□□□□ 0.35
PCDHA1-203ENST00000504120 KBTBD13C9JR72 458 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 FOXN3O00409 490 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 SYF2O95926 243 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 KLRK1P26718 216 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 PTGISQ16647 500 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 CD302Q8IX05 232 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 MUC3BQ9H195 1237 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 PABPC3Q9H361 631 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 SPON1Q9HCB6 807 aa17.23■□□□□ 0.35
PCDHA1-203ENST00000504120 KIAA1257Q9ULG3 409 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms