RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 KRT10P13645 584 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 ERV3-1Q14264 604 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 SEMA3AQ14563 771 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 DALRD3Q5D0E6 543 aaKnown RBP3.05□□□□□ -1.92
SGMS1-205ENST00000498514 PCID2Q5JVF3 399 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 RBM20Q5T481 1227 aaKnown RBP3.05□□□□□ -1.92
SGMS1-205ENST00000498514 Q6ZTC4 211 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 WDR53Q7Z5U6 358 aaPredicted RBP3.05□□□□□ -1.92
SGMS1-205ENST00000498514 KRT78Q8N1N4 520 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 KLHDC4Q8TBB5 520 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 FAM136AQ96C01 138 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 TMX3Q96JJ7 454 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 PPP1R10Q96QC0 940 aaKnown RBP3.05□□□□□ -1.92
SGMS1-205ENST00000498514 TDP1Q9NUW8 608 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 DLL3Q9NYJ7 618 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 INTUQ9ULD6 942 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 MAPRE3Q9UPY8 281 aa3.05□□□□□ -1.92
SGMS1-205ENST00000498514 FAM90A8PA6NJQ4 464 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 CD8B2A6NJW9 211 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 PRSS44E7EML9 344 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 E9PLN8 166 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 PDE8AO60658 829 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 SOAT2O75908 522 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 FAM90A13PP0C7W8 464 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 FAM90A24PP0C7X0 464 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 OSMP13725 252 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 LPOP22079 712 aaPredicted RBP3.04□□□□□ -1.92
SGMS1-205ENST00000498514 MTNR1BP49286 362 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
SGMS1-205ENST00000498514 HTRA4P83105 476 aaPredicted RBP3.04□□□□□ -1.92
SGMS1-205ENST00000498514 NAPRTQ6XQN6 538 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 RBMXL3Q8N7X1 1067 aaKnown RBP3.04□□□□□ -1.92
SGMS1-205ENST00000498514 RAB24Q969Q5 203 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 COQ8BQ96D53 544 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 VKORC1Q9BQB6 163 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 SMOC2Q9H3U7 446 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 PROCRQ9UNN8 238 aa3.04□□□□□ -1.92
SGMS1-205ENST00000498514 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.04□□□□□ -1.92
SGMS1-205ENST00000498514 A0A087X0B3 334 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 LY6G6EA0A0G2JKS1 128 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 KRT86O43790 486 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 ITGALP20701 1170 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 ATP5F1P24539 256 aaPredicted RBP3.03□□□□□ -1.92
SGMS1-205ENST00000498514 MT3P25713 68 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 IL1R2P27930 398 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 CD6P30203 668 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 GPR3P46089 330 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 KCNJ5P48544 419 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 CYP4F2P78329 520 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 CDC42EP1Q00587 391 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 TARDBPQ13148 414 aaKnown RBP eCLIP3.03□□□□□ -1.92
SGMS1-205ENST00000498514 GTF2H3Q13889 308 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 KRT81Q14533 505 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 RBMS2Q15434 407 aaKnown RBP3.03□□□□□ -1.92
SGMS1-205ENST00000498514 TRIM72Q6ZMU5 477 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 DDX46Q7L014 1031 aaKnown RBP3.03□□□□□ -1.92
SGMS1-205ENST00000498514 RNF180Q86T96 592 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 CYP2W1Q8TAV3 490 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 IFI44Q8TCB0 444 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 NRG4Q8WWG1 115 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 ZC3H10Q96K80 434 aaKnown RBP3.03□□□□□ -1.92
SGMS1-205ENST00000498514 FAM118BQ9BPY3 351 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 HIPK2Q9H2X6 1198 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 KLHL13Q9P2N7 655 aa3.03□□□□□ -1.92
SGMS1-205ENST00000498514 FCHO1O14526 889 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 PPM1DO15297 605 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 PDHA1P08559 390 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 MYCLP1P12525 358 aaPredicted RBP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 PRF1P14222 555 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 ENGP17813 658 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 WASP42768 502 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 ZNF280AP59817 542 aaPredicted RBP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 FAPQ12884 760 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 TRIM71Q2Q1W2 868 aaKnown RBP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 CERKLQ49MI3 558 aaPredicted RBP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 TAF2Q6P1X5 1199 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 C9orf47Q6ZRZ4 202 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 MIGA2Q7L4E1 593 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 DTX2Q86UW9 622 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 FAM109AQ8N4B1 249 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 PSD4Q8NDX1 1056 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 SCAMP4Q969E2 229 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 RITA1Q96K30 269 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 CTAGE1Q96RT6 745 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 FOXP1Q9H334 677 aaPredicted RBP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 VTA1Q9NP79 307 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 SERHLQ9NQF3 203 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 DUSP22Q9NRW4 184 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 CCM2LQ9NUG4 571 aaPredicted RBP3.02□□□□□ -1.93
SGMS1-205ENST00000498514 C14orf119Q9NWQ9 140 aa3.02□□□□□ -1.93
SGMS1-205ENST00000498514 FNDC1Q4ZHG4 1894 aaPredicted RBP3.01□□□□□ -1.93
SGMS1-205ENST00000498514 POC1B-GALNT4F8VUJ3 575 aa3.01□□□□□ -1.93
SGMS1-205ENST00000498514 SLC16A3O15427 465 aaKnown RBP3.01□□□□□ -1.93
SGMS1-205ENST00000498514 TLR5O60602 858 aa3.01□□□□□ -1.93
SGMS1-205ENST00000498514 ABLIM3O94929 683 aa3.01□□□□□ -1.93
SGMS1-205ENST00000498514 HTR6P50406 440 aa3.01□□□□□ -1.93
SGMS1-205ENST00000498514 STRN3Q13033 797 aa3.01□□□□□ -1.93
SGMS1-205ENST00000498514 RAB39AQ14964 217 aa3.01□□□□□ -1.93
SGMS1-205ENST00000498514 NPY5RQ15761 445 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms