RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
SGMS1-205ENST00000498514 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
SGMS1-205ENST00000498514 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-205ENST00000498514 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
SGMS1-205ENST00000498514 FOXD1Q16676 465 aa15.95■□□□□ 0.14
SGMS1-205ENST00000498514 MSH5O43196 834 aa15.02■□□□□ -0
SGMS1-205ENST00000498514 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
SGMS1-205ENST00000498514 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
SGMS1-205ENST00000498514 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
SGMS1-205ENST00000498514 PPP6R1Q9UPN7 881 aa14.79□□□□□ -0.04
SGMS1-205ENST00000498514 ADRA2BP18089 450 aa14.74□□□□□ -0.05
SGMS1-205ENST00000498514 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
SGMS1-205ENST00000498514 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
SGMS1-205ENST00000498514 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
SGMS1-205ENST00000498514 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
SGMS1-205ENST00000498514 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
SGMS1-205ENST00000498514 CACNB1Q02641 598 aaPredicted RBP13□□□□□ -0.33
SGMS1-205ENST00000498514 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
SGMS1-205ENST00000498514 CNKSR2Q8WXI2 1034 aa12.93□□□□□ -0.34
SGMS1-205ENST00000498514 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
SGMS1-205ENST00000498514 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
SGMS1-205ENST00000498514 NCBP3Q53F19 620 aaKnown RBP12.61□□□□□ -0.39
SGMS1-205ENST00000498514 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
SGMS1-205ENST00000498514 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
SGMS1-205ENST00000498514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■□□ 15
SGMS1-205ENST00000498514 NPM3O75607 178 aaKnown RBP12.38□□□□□ -0.43
SGMS1-205ENST00000498514 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
SGMS1-205ENST00000498514 KCNA4P22459 653 aa12□□□□□ -0.49
SGMS1-205ENST00000498514 CAPN15O75808 1086 aa11.97□□□□□ -0.49
SGMS1-205ENST00000498514 SPINK5Q9NQ38 1064 aaPredicted RBP11.95□□□□□ -0.5
SGMS1-205ENST00000498514 DSG3P32926 999 aa11.92□□□□□ -0.5
SGMS1-205ENST00000498514 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
SGMS1-205ENST00000498514 APLP2Q06481 763 aa11.78□□□□□ -0.52
SGMS1-205ENST00000498514 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
SGMS1-205ENST00000498514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
SGMS1-205ENST00000498514 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
SGMS1-205ENST00000498514 ZNF219Q9P2Y4 722 aaPredicted RBP11.72□□□□□ -0.53
SGMS1-205ENST00000498514 POTEHQ6S545 545 aa11.67□□□□□ -0.54
SGMS1-205ENST00000498514 ABCB7O75027 752 aa11.66□□□□□ -0.54
SGMS1-205ENST00000498514 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
SGMS1-205ENST00000498514 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
SGMS1-205ENST00000498514 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
SGMS1-205ENST00000498514 POLA2Q14181 598 aa11.38□□□□□ -0.59
SGMS1-205ENST00000498514 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
SGMS1-205ENST00000498514 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
SGMS1-205ENST00000498514 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
SGMS1-205ENST00000498514 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
SGMS1-205ENST00000498514 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-205ENST00000498514 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
SGMS1-205ENST00000498514 OSCARQ8IYS5 282 aa11.01□□□□□ -0.65
SGMS1-205ENST00000498514 ZBTB22O15209 634 aa11□□□□□ -0.65
SGMS1-205ENST00000498514 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
SGMS1-205ENST00000498514 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
SGMS1-205ENST00000498514 PIP4P2Q8N4L2 257 aa10.9□□□□□ -0.66
SGMS1-205ENST00000498514 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
SGMS1-205ENST00000498514 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
SGMS1-205ENST00000498514 FBLN2P98095 1184 aa10.81□□□□□ -0.68
SGMS1-205ENST00000498514 FXR2P51116 673 aaKnown RBP eCLIP10.8□□□□□ -0.68
SGMS1-205ENST00000498514 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
SGMS1-205ENST00000498514 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
SGMS1-205ENST00000498514 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
SGMS1-205ENST00000498514 HAX1O00165 279 aa10.77□□□□□ -0.69
SGMS1-205ENST00000498514 MKRN4PQ13434 485 aaPredicted RBP10.66□□□□□ -0.7
SGMS1-205ENST00000498514 ZNF692Q9BU19 519 aaPredicted RBP10.65□□□□□ -0.7
SGMS1-205ENST00000498514 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
SGMS1-205ENST00000498514 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
SGMS1-205ENST00000498514 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
SGMS1-205ENST00000498514 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
SGMS1-205ENST00000498514 EVX2Q03828 476 aa10.58□□□□□ -0.72
SGMS1-205ENST00000498514 PABPN1Q86U42 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
SGMS1-205ENST00000498514 C19orf67A6NJJ6 358 aa10.46□□□□□ -0.73
SGMS1-205ENST00000498514 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
SGMS1-205ENST00000498514 CHADLQ6NUI6 762 aa10.43□□□□□ -0.74
SGMS1-205ENST00000498514 CSRNP3Q8WYN3 585 aa10.37□□□□□ -0.75
SGMS1-205ENST00000498514 GABBR2O75899 941 aa10.36□□□□□ -0.75
SGMS1-205ENST00000498514 FARP1Q9Y4F1 1045 aaPredicted RBP10.27□□□□□ -0.77
SGMS1-205ENST00000498514 CD44P16070 742 aaKnown RBP10.25□□□□□ -0.77
SGMS1-205ENST00000498514 LHX8Q68G74 356 aa10.19□□□□□ -0.78
SGMS1-205ENST00000498514 CLCN6P51797 869 aa10.17□□□□□ -0.78
SGMS1-205ENST00000498514 STAG3Q9UJ98 1225 aa10.17□□□□□ -0.78
SGMS1-205ENST00000498514 EHMT2Q96KQ7 1210 aa10.16□□□□□ -0.78
SGMS1-205ENST00000498514 POTEIP0CG38 1075 aa10.12□□□□□ -0.79
SGMS1-205ENST00000498514 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
SGMS1-205ENST00000498514 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
SGMS1-205ENST00000498514 ZRANB1Q9UGI0 708 aa10.08□□□□□ -0.8
SGMS1-205ENST00000498514 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
SGMS1-205ENST00000498514 DCBLD2Q96PD2 775 aa10.07□□□□□ -0.8
SGMS1-205ENST00000498514 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
SGMS1-205ENST00000498514 NPM1P06748 294 aaKnown RBP eCLIP9.96□□□□□ -0.82
SGMS1-205ENST00000498514 GALR2O43603 387 aaPredicted RBP9.95□□□□□ -0.82
SGMS1-205ENST00000498514 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
SGMS1-205ENST00000498514 PHF12Q96QT6 1004 aa9.91□□□□□ -0.82
SGMS1-205ENST00000498514 PROM2Q8N271 834 aa9.81□□□□□ -0.84
SGMS1-205ENST00000498514 OTUD5Q96G74 571 aa9.78□□□□□ -0.84
SGMS1-205ENST00000498514 POTEB2H3BUK9 544 aa9.77□□□□□ -0.85
SGMS1-205ENST00000498514 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
SGMS1-205ENST00000498514 MS4A3Q96HJ5 214 aa9.77□□□□□ -0.85
SGMS1-205ENST00000498514 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
SGMS1-205ENST00000498514 ASTLQ6HA08 431 aaPredicted RBP9.74□□□□□ -0.85
SGMS1-205ENST00000498514 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms