RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 BTBD19C9JJ37 291 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 EBAG9O00559 213 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 MEFVO15553 781 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 TCF4P15884 667 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ARF4P18085 180 aaPredicted RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 IVDP26440 423 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ATICP31939 592 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CDR1P51861 262 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 GTF2A2P52657 109 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ITGA8P53708 1063 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 RAD23BP54727 409 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 BYSLQ13895 437 aaKnown RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CCL15Q16663 113 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ZFYVE27Q5T4F4 411 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ANKS1BQ7Z6G8 1248 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 MS4A4AQ96JQ5 239 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 TRAIPQ9BWF2 469 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 TSPYL1Q9H0U9 437 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 SDCBP2Q9H190 292 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 SMYD3Q9H7B4 428 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 CNOT10Q9H9A5 744 aaKnown RBP13.8□□□□□ -0.2
GARNL3-220ENST00000496711 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 NEU2Q9Y3R4 380 aa13.8□□□□□ -0.2
GARNL3-220ENST00000496711 F8VP50 259 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 CSDE1O75534 798 aaKnown RBP13.79□□□□□ -0.2
GARNL3-220ENST00000496711 PTPN7P35236 360 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 COPS2P61201 443 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 TRIP13Q15645 432 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-220ENST00000496711 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 UBAP2Q5T6F2 1119 aaKnown RBP13.79□□□□□ -0.2
GARNL3-220ENST00000496711 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 PNMA8AQ86V59 439 aaPredicted RBP13.79□□□□□ -0.2
GARNL3-220ENST00000496711 CCDC89Q8N998 374 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 BBOF1Q8ND07 529 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 CDC42EP4Q9H3Q1 356 aaKnown RBP13.79□□□□□ -0.2
GARNL3-220ENST00000496711 VRTNQ9H8Y1 702 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 AAASQ9NRG9 546 aa13.79□□□□□ -0.2
GARNL3-220ENST00000496711 DDX56Q9NY93 547 aaKnown RBP13.79□□□□□ -0.2
GARNL3-220ENST00000496711 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 PI4K2BG5E9Z4 385 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 H3BRB1 525 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 RGS16O15492 202 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 CILPO75339 1184 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 TJP3O95049 919 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 SNAI1O95863 264 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 P4HA1P13674 534 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 ATF7P17544 494 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 ADCY8P40145 1251 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 GSCP56915 257 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 LMNB2Q03252 620 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 TMEM132DQ14C87 1099 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 ATP13A4Q4VNC1 1196 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 MFSD7Q6UXD7 560 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 SLC4A11Q8NBS3 891 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 STMN4Q9H169 189 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 TUT1Q9H6E5 874 aaKnown RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 LIASO43766 372 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 TSPAN1O60635 241 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 AGTP01019 485 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 MMP3P08254 477 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 CHKAP35790 457 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 VPS41P49754 854 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 CDH8P55286 799 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 GRB14Q14449 540 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 GRIK4Q16099 956 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 SLC10A6Q3KNW5 377 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 KAZNQ674X7 775 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 GPR142Q7Z601 462 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 NLRP14Q86W24 1093 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
GARNL3-220ENST00000496711 BRI3BPQ8WY22 251 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 WDR35Q9P2L0 1181 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 HMGXB4Q9UGU5 601 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 ITGA11Q9UKX5 1188 aa13.78□□□□□ -0.2
GARNL3-220ENST00000496711 hCG_1818297A0A087WSY0 165 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 TLDC2A0PJX2 215 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 SMIM23A6NLE4 172 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 SIGLEC16A6NMB1 481 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 E7EVH7 732 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 TULP2O00295 520 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 KRT3P12035 628 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 HOXD8P13378 290 aaPredicted RBP13.77□□□□□ -0.21
GARNL3-220ENST00000496711 KRT10P13645 584 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 PSMA2P25787 234 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 PSMC1P62191 440 aaKnown RBP13.77□□□□□ -0.21
GARNL3-220ENST00000496711 ORC1Q13415 861 aa13.77□□□□□ -0.21
GARNL3-220ENST00000496711 DUSP28Q4G0W2 176 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms