RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 MSL3Q8N5Y2 521 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 ANKRD36BP1Q96IX9 119 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 FAM111AQ96PZ2 611 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 RPF1Q9H9Y2 349 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC1-209ENST00000495100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC1-209ENST00000495100 KCND2Q9NZV8 630 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 DIS3Q9Y2L1 958 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 SNX9Q9Y5X1 595 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 KCNN4O15554 427 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 DKC1O60832 514 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC1-209ENST00000495100 LCP1P13796 627 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 GPC3P51654 580 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 SESN2P58004 480 aaPredicted RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 TREML2Q5T2D2 321 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 CES3Q6UWW8 571 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 PDIK1LQ8N165 341 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 CCDC110Q8TBZ0 833 aa14.16□□□□□ -0.14
GPC1-209ENST00000495100 CCDC124Q96CT7 223 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.16□□□□□ -0.14
GPC1-209ENST00000495100 XPO7Q9UIA9 1087 aaKnown RBP14.16□□□□□ -0.14
GPC1-209ENST00000495100 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
GPC1-209ENST00000495100 MCF2LO15068 1137 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 TXNP10599 105 aaKnown RBP14.15□□□□□ -0.14
GPC1-209ENST00000495100 PDGFRAP16234 1089 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 MROH9Q5TGP6 573 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 FYB2Q5VWT5 728 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 CD302Q8IX05 232 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ABRAQ8N0Z2 381 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 FBXO36Q8NEA4 188 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 LPAR1Q92633 364 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ACTR5Q9H9F9 607 aaPredicted RBP14.15□□□□□ -0.14
GPC1-209ENST00000495100 PAPPAQ13219 1627 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 NAV1Q8NEY1 1877 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 NPTXRO95502 500 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 GDF10P55107 478 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 KCTD2Q14681 263 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ANKRD22Q5VYY1 191 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 EFCAB12Q6NXP0 572 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ZCCHC23Q6ZST2 131 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 DCLK2Q8N568 766 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 TFAP2BQ92481 460 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 MYCBPQ99417 103 aaPredicted RBP14.15□□□□□ -0.14
GPC1-209ENST00000495100 PDGFCQ9NRA1 345 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 PHTF1Q9UMS5 762 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 FAM47DPA6NHR8 397 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ARHGAP42A6NI28 874 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ADM5C9JUS6 153 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 KRT16P08779 473 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 ZNF286BP0CG31 522 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 SPARCL1Q14515 664 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 SCUBE3Q8IX30 993 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 DHX35Q9H5Z1 703 aaKnown RBP14.15□□□□□ -0.14
GPC1-209ENST00000495100 SMYD3Q9H7B4 428 aa14.15□□□□□ -0.14
GPC1-209ENST00000495100 CITO14578 2027 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 CREB3O43889 395 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 DDNO94850 711 aaPredicted RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 SUPT20HL2P0C7V6 817 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 POLR2BP30876 1174 aaKnown RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 SUPT20HL1Q3ZLR7 823 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 APBB1IPQ7Z5R6 666 aaPredicted RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 MTDHQ86UE4 582 aaKnown RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 LRRC6Q86X45 466 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 CLMNQ96JQ2 1002 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 CYP39A1Q9NYL5 469 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 CNTNAP1P78357 1384 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 PRPSAP2O60256 369 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 PTPRAP18433 802 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 HSD17B4P51659 736 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 ACOT1Q86TX2 421 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 FITM2Q8N6M3 262 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 AGAP11Q8TF27 550 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 MAIP1Q8WWC4 291 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 NDRG1Q92597 394 aaKnown RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 RUBCNQ92622 972 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 CYP4F11Q9HBI6 524 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 ANKEF1Q9NU02 776 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 HMGXB4Q9UGU5 601 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 IP6K2Q9UHH9 426 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 PACSIN3Q9UKS6 424 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 SNX3O60493 162 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 ANP32DO95626 131 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 CAPSQ13938 189 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 NEDD9Q14511 834 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 TAF11Q15544 211 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 PGLYRP2Q96PD5 576 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 PPARGC1AQ9UBK2 798 aaKnown RBP14.14□□□□□ -0.15
GPC1-209ENST00000495100 SCINQ9Y6U3 715 aa14.14□□□□□ -0.15
GPC1-209ENST00000495100 ZBED1O96006 694 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 UBA1P22314 1058 aaKnown RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 ELF3P78545 371 aaPredicted RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 POU5F1Q01860 360 aaKnown RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 KIZQ2M2Z5 673 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 TRMT10CQ7L0Y3 403 aaKnown RBP14.13□□□□□ -0.15
GPC1-209ENST00000495100 SLC25A41Q8N5S1 370 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 P3H4Q92791 437 aa14.13□□□□□ -0.15
GPC1-209ENST00000495100 ART4Q93070 314 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms