RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 COL19A1Q14993 1142 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 LIN9Q5TKA1 542 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 FOXR2Q6PJQ5 311 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 DPH6Q7L8W6 267 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 GPR152Q8TDT2 470 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 MSLNLQ96KJ4 702 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 SEPT5Q99719 369 aaPredicted RBP11.9□□□□□ -0.5
APTX-230ENST00000494649 CD207Q9UJ71 328 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 FBXW11Q9UKB1 542 aa11.9□□□□□ -0.5
APTX-230ENST00000494649 MTMR11A4FU01 709 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 GRXCR2A6NFK2 248 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 NCK2O43639 380 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 ELF1P32519 619 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 ZNF165P49910 485 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 MARSP56192 900 aaKnown RBP11.9□□□□□ -0.51
APTX-230ENST00000494649 WDR44Q5JSH3 913 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 PTCRAQ6ISU1 281 aaPredicted RBP11.9□□□□□ -0.51
APTX-230ENST00000494649 RRAGAQ7L523 313 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 SMRP1Q8NCR6 262 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 ST13P5Q8NFI4 369 aaPredicted RBP11.9□□□□□ -0.51
APTX-230ENST00000494649 KAT5Q92993 513 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 TUBGCP2Q9BSJ2 902 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 ZCWPW1Q9H0M4 648 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 VPS16Q9H269 839 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 COG5Q9UP83 839 aa11.9□□□□□ -0.51
APTX-230ENST00000494649 USP15Q9Y4E8 981 aaPredicted RBP11.9□□□□□ -0.51
APTX-230ENST00000494649 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 OR6C75A6NL08 312 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 GABRDO14764 452 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 ABLIM3O94929 683 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 ATP1A3P13637 1013 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 ATF2P15336 505 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 GPR15P49685 360 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 TSPY1Q01534 308 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 CYP27A1Q02318 531 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 NCAPHQ15003 741 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 PTPN21Q16825 1174 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 MGAT5BQ3V5L5 792 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 TCP11X2Q5H9J9 407 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 MDH1BQ5I0G3 518 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 INTS6LQ5JSJ4 861 aaKnown RBP11.89□□□□□ -0.51
APTX-230ENST00000494649 PPM1LQ5SGD2 360 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 SDHAF4Q5VUM1 108 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 GJB7Q6PEY0 223 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 TMEM184AQ6ZMB5 413 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 LUZP1Q86V48 1076 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 DHX40Q8IX18 779 aaKnown RBP11.89□□□□□ -0.51
APTX-230ENST00000494649 NECAB3Q96P71 396 aaPredicted RBP11.89□□□□□ -0.51
APTX-230ENST00000494649 TWNKQ96RR1 684 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 NIF3L1Q9GZT8 377 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 CRTAC1Q9NQ79 661 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
APTX-230ENST00000494649 TCF20Q9UGU0 1960 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 LETM1O95202 739 aaPredicted RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 LHX1P48742 406 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 NDST1P52848 882 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 NTHL1P78549 312 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 TWF1Q12792 350 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 GPR17Q13304 367 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 MIIPQ5JXC2 388 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 ACOT1Q86TX2 421 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 ARHGEF19Q8IW93 802 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 FAM114A1Q8IWE2 563 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 GPR65Q8IYL9 337 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 PPM1KQ8N3J5 372 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 ACBD6Q9BR61 282 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 S1PR5Q9H228 398 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 VRTNQ9H8Y1 702 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 SFXN1Q9H9B4 322 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 PIDD1Q9HB75 910 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 CLDN5O00501 218 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 MBTPS2O43462 519 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 ZMYND10O75800 440 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 CALCAP01258 141 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 P4HA1P13674 534 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 SLC9A1P19634 815 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 PAX3P23760 479 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 CYP2F1P24903 491 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 ENPEPQ07075 957 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 KRT31Q15323 416 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 LIMS2Q7Z4I7 341 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 C12orf29Q8N999 325 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 SMG7Q92540 1137 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 MYLPFQ96A32 169 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 ASB2Q96Q27 587 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 INTS2Q9H0H0 1204 aaKnown RBP11.88□□□□□ -0.51
APTX-230ENST00000494649 NDST4Q9H3R1 872 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
APTX-230ENST00000494649 FAM49BQ9NUQ9 324 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms