RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 SPOPLQ6IQ16 392 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 TCEAL8Q8IYN2 117 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
LIMK1-207ENST00000491052 FBXL13Q8NEE6 735 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 KBTBD7Q8WVZ9 684 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 TAF4BQ92750 862 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 SLC35C1Q96A29 364 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 NECTIN4Q96NY8 510 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 MED15Q96RN5 788 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 MRPL45Q9BRJ2 306 aaKnown RBP13.74□□□□□ -0.21
LIMK1-207ENST00000491052 PRKD2Q9BZL6 878 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 SMYD3Q9H7B4 428 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 VRTNQ9H8Y1 702 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 INSL5Q9Y5Q6 135 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 ANAPC1Q9H1A4 1944 aa13.74□□□□□ -0.21
LIMK1-207ENST00000491052 CUL9Q8IWT3 2517 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 XYLBO75191 536 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 CCDC192P0DO97 292 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 WARSP23381 471 aaKnown RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 SP100P23497 879 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 ERCC5P28715 1186 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 HOXA9P31269 272 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 PSMC1P62191 440 aaKnown RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 DUSP4Q13115 394 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 STX1AQ16623 288 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 UVSSAQ2YD98 709 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 CBWD3Q5JTY5 395 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 CBWD5Q5RIA9 395 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 LIMS2Q7Z4I7 341 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 ATAD1Q8NBU5 361 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 OR6B3Q8NGW1 331 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 ZNF707Q96C28 371 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 CNOT6LQ96LI5 555 aaKnown RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 UHRF1Q96T88 793 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 SYT15Q9BQS2 421 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 ACBD6Q9BR61 282 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 ABI2Q9NYB9 513 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-207ENST00000491052 MAFFQ9ULX9 164 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 YIPF1Q9Y548 306 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 C5orf42Q9H799 3197 aa13.73□□□□□ -0.21
LIMK1-207ENST00000491052 CLUHO75153 1309 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 GABRDO14764 452 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 TACC1O75410 805 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 VNN2O95498 520 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 PDGFRBP09619 1106 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 LMO2P25791 158 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 GNL1P36915 607 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-207ENST00000491052 FMO5P49326 533 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 CDH8P55286 799 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-207ENST00000491052 TWF1Q12792 350 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 CCDC142Q17RM4 750 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 RTL10Q7L3V2 364 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 LRRTM3Q86VH5 581 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 TTC9BQ8N6N2 239 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 SEMA4DQ92854 862 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 RPGRIP1Q96KN7 1286 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 SEPT5Q99719 369 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-207ENST00000491052 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-207ENST00000491052 NIF3L1Q9GZT8 377 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 SDCBP2Q9H190 292 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 CRISPLD1Q9H336 500 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 TMLHEQ9NVH6 421 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 ANO10Q9NW15 660 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 PRKAG3Q9UGI9 489 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 CDH9Q9ULB4 789 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
LIMK1-207ENST00000491052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.21
LIMK1-207ENST00000491052 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-207ENST00000491052 A8MXQ7 604 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 N4BP1O75113 896 aaKnown RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 ATP2C2O75185 946 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 LRRN2O75325 713 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 SOAT2O75908 522 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 SSTR3P32745 418 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 ASPAP45381 313 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 MARSP56192 900 aaKnown RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 ZP2Q05996 745 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 SMARCB1Q12824 385 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 PLD1Q13393 1074 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 KLHL40Q2TBA0 621 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 MGAT5BQ3V5L5 792 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 CT47A1Q5JQC4 288 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 C11orf57Q6ZUT1 292 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 GRASPQ7Z6J2 395 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 ADHFE1Q8IWW8 467 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 ELMOD1Q8N336 334 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 SPPL2BQ8TCT7 592 aa13.71□□□□□ -0.21
LIMK1-207ENST00000491052 C2orf15Q8WU43 125 aaKnown RBP13.71□□□□□ -0.21
LIMK1-207ENST00000491052 RHOBTB2Q9BYZ6 727 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms